Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00682 ATGGCCTACTCCAAGGACCGCGAGACCTTGATTTATGTCGCCAAGCTGGCTGAACAGGCTGAGCGTTACGATGAGATGGTGGAAGCAATGAAGAGTGTTGCAGAGCTTGATGTTGAATTGACAGTTGAAGCTGCAACCAGCTCTGCGGAAGCTGATTTACCACCTACACATCCCATCCGATTGGGATTGGCATTGAATTTCTCTGTCTTTTATTATGAGATCATGAATTCACCTGAGAGGGCTTGCCACCTGGCAAAGCAAGCTTTTGATGAAGCCATCTCCGAGCTTGATACTTTGAACGAGGAATCATACAAGGACAGCACTTTAATCATGCAGCTTCTTCGAGACAATTTAACATTGTGGACTTCTGACATTCCTGAGGATGGAGATGATGGTCAGAAGATCAATGGAACTGCAAAGATCGGTGGGTTTGATGCTGCAGAGGTTGGTTGGTCACATCTCTCGGCTATAAAATCTGTGTTTTTTGACTGCCCTATTTATTGA 504 45.24 MAYSKDRETLIYVAKLAEQAERYDEMVEAMKSVAELDVELTVEAATSSAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDGQKINGTAKIGGFDAAEVGWSHLSAIKSVFFDCPIY 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7733171 7735283 + Bda001606.1 Bda13g00682 18813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00682 167 PANTHER 14-3-3 PROTEIN 4 43 IPR000308 -
Bda13g00682 167 PANTHER 14-3-3 PROTEIN 43 146 IPR000308 -
Bda13g00682 167 SUPERFAMILY 14-3-3 protein 6 124 IPR036815 -
Bda13g00682 167 Coils Coil 13 33 - -
Bda13g00682 167 SMART 1433_4 7 135 IPR023410 -
Bda13g00682 167 ProSitePatterns 14-3-3 proteins signature 2. 104 123 IPR023409 -
Bda13g00682 167 PANTHER 14-3-3-LIKE PROTEIN D ISOFORM X1 43 146 - -
Bda13g00682 167 Gene3D - 1 44 IPR036815 -
Bda13g00682 167 Gene3D - 45 136 IPR036815 -
Bda13g00682 167 Coils Coil 82 102 - -
Bda13g00682 167 PANTHER 14-3-3-LIKE PROTEIN D ISOFORM X1 4 43 - -
Bda13g00682 167 PRINTS 14-3-3 protein zeta signature 41 67 IPR000308 -
Bda13g00682 167 PRINTS 14-3-3 protein zeta signature 68 94 IPR000308 -
Bda13g00682 167 PRINTS 14-3-3 protein zeta signature 95 124 IPR000308 -
Bda13g00682 167 Pfam 14-3-3 protein 43 122 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g00682 Bda-Chr13:7733171 Bda02g00029 Bda-Chr2:1378996 5.47E-14 dispersed
Bda13g00682 Bda-Chr13:7733171 Bda06g00292 Bda-Chr6:4875767 8.10E-19 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00682 K06630 - cit:102608475 202.601