Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01024 CTGACGCCCTACAGCTTCGAGCGTCGCGATCCCGGCCCCGACGATGTGCTGATCGACATCAAATACTGCGGTGTCTGCCACTCCGACCTGCACGCCGCGCGCGGCGAGACGGGCGGCACGGCCTTCCCCCTGGTGCCGGGTCATGAGATCGCGGGCGTGGTCAAGGCGGTCGGATCGAACGTCACCCGCTTCAAGGAAGGCGACCGCGTCGGCGTCGGCTGCATGGTCGACAGCTGCCGTGAATGCGCCTCCTGCCAGGAAGGCGTCGAGCAATATTGCATCCCCGGCTTCACCGGCACCTATGGCGGCAAGGACAAGAAGGGCGGCACGTCGGAAGCCATCACCCAGGGCGGCTATTCCGACCACATCACCGTCGATCAGCATTTTGTCCTGTCCATCCCCGACAGCCTGGCGCTGGATGTCGCCGCCCCCCTGCTGTGCGCGGGCATCACCACCTATTCGCCGCTGAAGGAATGGGGCGTTGGCCCCGGCTCCAAGGTCGCGGTCATCGGCCTGGGCGGTCTGGGCCACATGGCCGTCAAGCTGGCGGCGGCCATGGGGGCGGAAGTCACCGTCCTGTCCACCTCGGACCGCAAGAAGGCCGACGCCGAGCGGATGGGCGCCAAACACTTCCTGATCAACTCCGACAAGGATGCGATGAAGGCGGCCGCCGAGAAGTTCGACCTGATCATCAATACCGTCTCGGCCACGCACGAGATCGCCAGCCATATCCAGTTGCTCGCGCGCGACGGCACAATGATCATGCTGGGCCTGACGACCGAGGGCCTGCCGGTCTTCGCCATGCCCCTGCTGTGGCGTCGTCGCCGCATCGCCGGCTCGCTGATCGGCGGCATTCGCGAAACCCAGGAGATGCTGGACTTCTGCGCCGAGCACGGCATCGCCTGCGACATCGAGACCATCGCTCCGGATCAGATCAACGACGCCTATGAGCGGATGCTGAAATCCGACGTCCGCTATCGCTTTGTCATCGATATGGAAAAGCTGGCCGCCTGA 1014 65.09 LTPYSFERRDPGPDDVLIDIKYCGVCHSDLHAARGETGGTAFPLVPGHEIAGVVKAVGSNVTRFKEGDRVGVGCMVDSCRECASCQEGVEQYCIPGFTGTYGGKDKKGGTSEAITQGGYSDHITVDQHFVLSIPDSLALDVAAPLLCAGITTYSPLKEWGVGPGSKVAVIGLGGLGHMAVKLAAAMGAEVTVLSTSDRKKADAERMGAKHFLINSDKDAMKAAAEKFDLIINTVSATHEIASHIQLLARDGTMIMLGLTTEGLPVFAMPLLWRRRRIAGSLIGGIRETQEMLDFCAEHGIACDIETIAPDQINDAYERMLKSDVRYRFVIDMEKLAA 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 11992832 11993845 + Bda013771.1 Bda13g01024 19155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01024 337 SMART PKS_ER_names_mod 1 330 IPR020843 GO:0016491
Bda13g01024 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 139 300 IPR036291 -
Bda13g01024 337 Pfam Zinc-binding dehydrogenase 174 296 IPR013149 -
Bda13g01024 337 Gene3D - 148 302 - -
Bda13g01024 337 Pfam Alcohol dehydrogenase GroES-like domain 13 132 IPR013154 -
Bda13g01024 337 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 8 1 334 - -
Bda13g01024 337 PANTHER ALDEHYDE REDUCTASE 1 334 - -
Bda13g01024 337 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 47 61 IPR002328 GO:0008270|GO:0016491
Bda13g01024 337 CDD CAD1 1 331 - -
Bda13g01024 337 Gene3D - 1 332 - -
Bda13g01024 337 SUPERFAMILY GroES-like 3 161 IPR011032 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g01059 Bda-Chr4:61585132 Bda13g01024 Bda-Chr13:11992832 1.24E-42 dispersed
Bda13g01024 Bda-Chr13:11992832 Bda14g01320 Bda-Chr14:14817228 7.31E-109 dispersed
Bda13g01024 Bda-Chr13:11992832 Bda14g01315 Bda-Chr14:14727293 3.45E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01024 K13979 - bsb:Bresu_0822 535.028