Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g01268 | ATGCAAGAGCAAGCTTCCACTTCTGTCGCCGCTATTTCTTTGCCTTCCAGCAGTGATAGGTCCTCCAGCTCTGCTCTTCATCTTGACGTTAAAGAAGGTATGGAGAGCGATGAGGAGATCAGGAGAGTGCCGGAGTTGGGAGGAGAATCAGCTGGAACTTCAGCATCCGGCAGAGATACTGGTTCCAGGGCCGGTTCTGGGCTGGTAAGAGTTGCACGGGAAGGTCAAAGAAAGAGGGGAAGAAGCCCAGCTGACAGAGAAAGTAAAAGACTCAAAAGATTGTTGAGAAACAGAGTCTCAGCACAGCAAGCTAGGGAGAGGAAGAAGGCATACTTGAGTGACTTGGAAACTCGGGTCAAAGAGTTGGAGAAAAAGAACTCGGAACTGGAAGAGAGGCTCTCCACTTTACAGAACGAGAATCAGATGCTTAGACAGGTATCTCTGCTTCATTATCTTAATTTCATGAATGACATTCTAATGCTTATTTTTATCTTGCAGATTTTGAAGAACACAACAGCTAGCAGGAAAAGTAGTAGTAGTAGCAACAATGCGGATGGATCTCTGTAG | 567 | 46.03 | MQEQASTSVAAISLPSSSDRSSSSALHLDVKEGMESDEEIRRVPELGGESAGTSASGRDTGSRAGSGLVRVAREGQRKRGRSPADRESKRLKRLLRNRVSAQQARERKKAYLSDLETRVKELEKKNSELEERLSTLQNENQMLRQVSLLHYLNFMNDILMLIFILQILKNTTASRKSSSSSNNADGSL | 188 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 35052375 | 35053331 | - | Bda000073.1 | Bda13g01268 | 19399 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g01268 | 188 | CDD | bZIP_HY5-like | 90 | 141 | - | - | |
Bda13g01268 | 188 | MobiDBLite | consensus disorder prediction | 30 | 45 | - | - | |
Bda13g01268 | 188 | Gene3D | Single helix bin | 108 | 146 | - | - | |
Bda13g01268 | 188 | PRINTS | cAMP response element binding (CREB) protein signature | 102 | 122 | - | - | |
Bda13g01268 | 188 | PRINTS | cAMP response element binding (CREB) protein signature | 84 | 100 | - | - | |
Bda13g01268 | 188 | PRINTS | cAMP response element binding (CREB) protein signature | 122 | 139 | - | - | |
Bda13g01268 | 188 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 87 | 145 | IPR004827 | GO:0003700|GO:0006355 | |
Bda13g01268 | 188 | MobiDBLite | consensus disorder prediction | 1 | 102 | - | - | |
Bda13g01268 | 188 | Coils | Coil | 84 | 146 | - | - | |
Bda13g01268 | 188 | Pfam | bZIP transcription factor | 86 | 145 | IPR004827 | GO:0003700|GO:0006355 | |
Bda13g01268 | 188 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bda13g01268 | 188 | PANTHER | TRANSCRIPTIONAL ACTIVATOR HAC1 | 1 | 181 | IPR044280 | GO:0000981|GO:0045944 | |
Bda13g01268 | 188 | SUPERFAMILY | Leucine zipper domain | 89 | 145 | IPR046347 | GO:0003700|GO:0006355 | |
Bda13g01268 | 188 | SMART | brlzneu | 85 | 149 | IPR004827 | GO:0003700|GO:0006355 | |
Bda13g01268 | 188 | PANTHER | TRANSCRIPTIONAL ACTIVATOR HAC1 | 1 | 181 | - | - | |
Bda13g01268 | 188 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 92 | 107 | IPR004827 | GO:0003700|GO:0006355 | |
Bda13g01268 | 188 | MobiDBLite | consensus disorder prediction | 72 | 102 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g00765 | Bda13g01268 | CCT | |
Bda01g00995 | Bda13g01268 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00581 | Bda-Chr3:4838330 | Bda13g01268 | Bda-Chr13:35052375 | 2.96E-07 | dispersed | |
Bda11g00697 | Bda-Chr11:6928672 | Bda13g01268 | Bda-Chr13:35052375 | 1.26E-06 | dispersed | |
Bda13g01268 | Bda-Chr13:35052375 | Bda15g01010 | Bda-Chr15:18817320 | 3.95E-06 | dispersed | |
Bda01g00995 | Bda-Chr1:43571646 | Bda13g01268 | Bda-Chr13:35052375 | 3.01E-81 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16924 | PF00170 | bZIP_1 | 1.70E-14 | CL0018 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g01268 | K16241 | - | csv:101218051 | 228.794 |