Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01268 ATGCAAGAGCAAGCTTCCACTTCTGTCGCCGCTATTTCTTTGCCTTCCAGCAGTGATAGGTCCTCCAGCTCTGCTCTTCATCTTGACGTTAAAGAAGGTATGGAGAGCGATGAGGAGATCAGGAGAGTGCCGGAGTTGGGAGGAGAATCAGCTGGAACTTCAGCATCCGGCAGAGATACTGGTTCCAGGGCCGGTTCTGGGCTGGTAAGAGTTGCACGGGAAGGTCAAAGAAAGAGGGGAAGAAGCCCAGCTGACAGAGAAAGTAAAAGACTCAAAAGATTGTTGAGAAACAGAGTCTCAGCACAGCAAGCTAGGGAGAGGAAGAAGGCATACTTGAGTGACTTGGAAACTCGGGTCAAAGAGTTGGAGAAAAAGAACTCGGAACTGGAAGAGAGGCTCTCCACTTTACAGAACGAGAATCAGATGCTTAGACAGGTATCTCTGCTTCATTATCTTAATTTCATGAATGACATTCTAATGCTTATTTTTATCTTGCAGATTTTGAAGAACACAACAGCTAGCAGGAAAAGTAGTAGTAGTAGCAACAATGCGGATGGATCTCTGTAG 567 46.03 MQEQASTSVAAISLPSSSDRSSSSALHLDVKEGMESDEEIRRVPELGGESAGTSASGRDTGSRAGSGLVRVAREGQRKRGRSPADRESKRLKRLLRNRVSAQQARERKKAYLSDLETRVKELEKKNSELEERLSTLQNENQMLRQVSLLHYLNFMNDILMLIFILQILKNTTASRKSSSSSNNADGSL 188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 35052375 35053331 - Bda000073.1 Bda13g01268 19399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01268 188 CDD bZIP_HY5-like 90 141 - -
Bda13g01268 188 MobiDBLite consensus disorder prediction 30 45 - -
Bda13g01268 188 Gene3D Single helix bin 108 146 - -
Bda13g01268 188 PRINTS cAMP response element binding (CREB) protein signature 102 122 - -
Bda13g01268 188 PRINTS cAMP response element binding (CREB) protein signature 84 100 - -
Bda13g01268 188 PRINTS cAMP response element binding (CREB) protein signature 122 139 - -
Bda13g01268 188 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 145 IPR004827 GO:0003700|GO:0006355
Bda13g01268 188 MobiDBLite consensus disorder prediction 1 102 - -
Bda13g01268 188 Coils Coil 84 146 - -
Bda13g01268 188 Pfam bZIP transcription factor 86 145 IPR004827 GO:0003700|GO:0006355
Bda13g01268 188 MobiDBLite consensus disorder prediction 1 24 - -
Bda13g01268 188 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 1 181 IPR044280 GO:0000981|GO:0045944
Bda13g01268 188 SUPERFAMILY Leucine zipper domain 89 145 IPR046347 GO:0003700|GO:0006355
Bda13g01268 188 SMART brlzneu 85 149 IPR004827 GO:0003700|GO:0006355
Bda13g01268 188 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 1 181 - -
Bda13g01268 188 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 92 107 IPR004827 GO:0003700|GO:0006355
Bda13g01268 188 MobiDBLite consensus disorder prediction 72 102 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00765 Bda13g01268 CCT
Bda01g00995 Bda13g01268 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00581 Bda-Chr3:4838330 Bda13g01268 Bda-Chr13:35052375 2.96E-07 dispersed
Bda11g00697 Bda-Chr11:6928672 Bda13g01268 Bda-Chr13:35052375 1.26E-06 dispersed
Bda13g01268 Bda-Chr13:35052375 Bda15g01010 Bda-Chr15:18817320 3.95E-06 dispersed
Bda01g00995 Bda-Chr1:43571646 Bda13g01268 Bda-Chr13:35052375 3.01E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16924 PF00170 bZIP_1 1.70E-14 CL0018 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01268 K16241 - csv:101218051 228.794