Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01271 ATGGGGTCCCCATTCAAGGGAATAGCCAAGGATTTCAGAGGAAGGGCTGCATGCTATAAGCAAGATTGGGTTTGTGCTCTCTGTTCAGGCGTTAGGATCTTGGCTCCAACTATGTATATCTTTTTTGCTTCTGCACTTCCTGTTATTGCATTTGGCGAGCAACTAAGCAGAGAAACTGATGGAAGATTAAGCACAGTGGAGACATTAGCCTCAACAGCTCTTTGTGGAATAATCCATTCGATATTTGGGGGGCAGCCATTGTTGATTTTAGGAGTTGCAGAGCCCACAGTTATAATGTACACTTATTTGTACAATTTCAGCAAAGGAAGGCCTCAACTAGGGAGCGAGCTTTATGTAGCTTGGGCTGGGTGGGTATGTGTATGGACAGCATTTCTGCTATTGCTTCTAGCTGTGTTCAATGCCTGCACCATCATCACCAAATTTACTAGAATTGCAGGAGAGCTATTTGGCATGTTAATTGCTGTCCTTTTTCTTCAAGAGGCTGTGAAGGGATTGATCAGCGAATTCACGATTCCTAAAGCCGAGAATCCAGCTTTAGAGAAATACCAATTCCAGTGGCTATATACAAATGGATTGCTTGCAATCATCTTTTCTTTTGGTTTACTTTTCACTGCCCTTAAAAGCAGAAGAGCAAGGTCATGGAGATATGGCACTGGGTGGTTTCGAGGCTTCATTTCTGACTATGGGGTCCCTCTGATGGTGTTGTTCTGGACGGCATTGTCTTTCGGAGTGCCGAAAAAAATTCCCGAAGGAGTTCCGAGGAGGCTTCACATCCAACTTCCTTGGGAATCTACTTCATTGTATCACTGGACAGTTGTGAAGGATATGGGGAAGGTTCCACCAATGTACATAATGGCTGCCTTTGTACCAGCCTTGATGATAGCCGGTCTGTATTTTTTTGACCATAGTGTAGCTTCTCAAATGGCACAGCAGAAGGAGTTCAACCTCCAAAAGCCATCTGCATACCATTATGACATCCTCTTACTTGGAATCATGACTTTGATTTGCGGGTTGCTGGGGCTTCCGCCTTCCAATGGCGTTCTACCTCAATCTCCAATGCACACCAAGAGTCTTGCTGTTCTAAAGCGACAGTTGATTCGAAGGAAAATGGTGAAGAGTGCCAAAGAATGTATTAGACGGAAAGCAAGCAACTCTGAAATCTATGGAAAGATGCAAGCGGTGTTCATTGAAATGGACACATCTCCGACTCCCAAAGAGCTGGAGGTCTTGAAGGAAGCTGTAATGAAAGACGATGGGGGTGACGAGAAACGAAAATTCGATCCAGAAAAACACATCGATGCCTATCTTCCTGTTCGAGTGAACGAGCAGAGGATGAGTAATGCCTTGCAGTCTCTCCTTGTTGGATTGTCAATGTGTGGAACATCTTTAATCAAAATGATACCCACTTCAGTCCTCTGGGGATATTTTGCCTACATGGCCATCGACAGCCTCCCCGGAAATCAGTTCTGGGACAGAATTCTGCTGCTCTTCATCACTCCTGGACGGCGGTTCAAGGTCCTGGAGGGCTCTCACGCATCGTTTATCGAATCTGTTCCATTCAAATACATTGCGATTTTTACGCTCTTTCAGTTCATATATTTGTTGATCTGTTTTGGGGTGACATGGATTCCGATAGCCGGCATATTATTCCCCATGCCATTTTTCCTTCTAGTGAGTCTTAGGCAACATGTTCTTCCCAAGCTGTTCCCGTCCAATTATCTTCAAGAACTCGACGCCTCTGAGTACGAGGAAATCGCTGGCGCCCCCCATCGCTCCATCAATCTCTCTGAAAAGGAGCCACCTGATGATGATTCCAGTGGCGATGAGAGCTCGGAAGATTTCTACGATGCCGAAATTTTGGACGAGATGACGACGCATAGAGGGGAGTTGAAGCTTAGGACTGTAAGCTTCAACTGA 1938 45.36 MGSPFKGIAKDFRGRAACYKQDWVCALCSGVRILAPTMYIFFASALPVIAFGEQLSRETDGRLSTVETLASTALCGIIHSIFGGQPLLILGVAEPTVIMYTYLYNFSKGRPQLGSELYVAWAGWVCVWTAFLLLLLAVFNACTIITKFTRIAGELFGMLIAVLFLQEAVKGLISEFTIPKAENPALEKYQFQWLYTNGLLAIIFSFGLLFTALKSRRARSWRYGTGWFRGFISDYGVPLMVLFWTALSFGVPKKIPEGVPRRLHIQLPWESTSLYHWTVVKDMGKVPPMYIMAAFVPALMIAGLYFFDHSVASQMAQQKEFNLQKPSAYHYDILLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRRKMVKSAKECIRRKASNSEIYGKMQAVFIEMDTSPTPKELEVLKEAVMKDDGGDEKRKFDPEKHIDAYLPVRVNEQRMSNALQSLLVGLSMCGTSLIKMIPTSVLWGYFAYMAIDSLPGNQFWDRILLLFITPGRRFKVLEGSHASFIESVPFKYIAIFTLFQFIYLLICFGVTWIPIAGILFPMPFFLLVSLRQHVLPKLFPSNYLQELDASEYEEIAGAPHRSINLSEKEPPDDDSSGDESSEDFYDAEILDEMTTHRGELKLRTVSFN 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 35074482 35077293 - Bda000076.1 Bda13g01271 19402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01271 645 Gene3D Helical hairpin bin 15 57 - -
Bda13g01271 645 Pfam HCO3- transporter family 196 370 IPR011531 GO:0006820|GO:0016021
Bda13g01271 645 Pfam HCO3- transporter family 445 535 IPR011531 GO:0006820|GO:0016021
Bda13g01271 645 Pfam HCO3- transporter family 4 178 IPR011531 GO:0006820|GO:0016021
Bda13g01271 645 MobiDBLite consensus disorder prediction 600 619 - -
Bda13g01271 645 PANTHER ANION EXCHANGE PROTEIN 2 645 IPR003020 GO:0005452|GO:0006820|GO:0016020
Bda13g01271 645 PANTHER BORON TRANSPORTER 6-RELATED 2 645 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00828 Bda-Chr3:7104994 Bda13g01271 Bda-Chr13:35074482 0 dispersed
Bda11g01655 Bda-Chr11:50632821 Bda13g01271 Bda-Chr13:35074482 4.33E-66 dispersed
Bda13g01271 Bda-Chr13:35074482 Bda14g00809 Bda-Chr14:6216618 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01271 K24194 - mnt:21388165 1087.4