Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda13g01275 | ATGGAAGGCAGTAAAGACTGTAATGTTGACAATGGGAGCTGCTCCAAGGAGGGTCTGCCTCCGAATCCTATTCCGGCGGCTCATCGGCAATGTATTACCTCTGATGTTGCTCAAACACCGTGTAAGAAATCACTCGTACGCCACCAATCTCTGATGACGACCGAGGTGATAGAAGTCACCAACGAACCTGAATTTAACAAAGATGACCTTGACTCTAACTTTATTCCAATTGTTCGATCCGGAGCATCCGCCAACATTGGGTGTCGTAGCAGCATGGAAGATGCATATGTTTGCATCGACAACTTTACGAGTGAAGATGGGGTTGAAAATTCTAACGATGGGCCTAGTGCTTTTTATGGGGTTTTCGATGGGCATGGAGGAAAGCATGCTGCCGAGTTTGCTCGTTGCTATTTACCGAAATTTGTAGTCGAGGATGAAGGTTTCCCTACGGATATTGAGAGGGTTATTGCTTCGGCATTTTTACAAACGGATGCAGCCTTTGAAGAAGCATGTTCCTCCGATGCAGCCCTTGCATCTGGCACAACAGCTTTGGCTGCACTTGTCCTAGGAAGGTTAGATGTTGTGTTCAAAGTTTTTTCTACCCGTAGGTCATTGGTGGTAGCAAATGCTGGAGACTGCCGAGCGGTGCTGAGTCGCCGTGGCAAAGCCATCGAAATGTCAAGGGACCACAAGCCCATTTGCATCAGAGAGAGGGCCCGCATAGAGGCATCCGGAGGATATATTTACGATGGTTATCTTAACGGACAGCTTAACGTGGCACGAGCATTGGGAGACTGGCACATGGAAGGAATGAAGGGTGGAGAAGGCGGGCCTCTAAGTGCCGAGCCTGAGGTCATGTTGATAAAACTAACGGAGGAAGATGAGTTTCTCGTAATAGGATGTGATGGAATGTGGGATGTATTCAGGAGCCAAAATGCTGTCGATTTTGCCAGACGGAGGCTGCAAGAGCATAACGACCCGGCCTTGTGCAGCAAGGAATTGGTCGAGGAGGCTTTGAAGAGAAAGAGTGGGGACAATTTGGCTGTGGTTGTGGTCTGTTTCCAAAGCAGTCCTCCGCCCAATTTGGCCACTCCTAGAAGGAGAGTGCGGCGGAGCTTTTCAGCTGAAGGGTTGAGGGAGCTTGCAAAGCTTTCTGGATAG | 1161 | 49.1 | MEGSKDCNVDNGSCSKEGLPPNPIPAAHRQCITSDVAQTPCKKSLVRHQSLMTTEVIEVTNEPEFNKDDLDSNFIPIVRSGASANIGCRSSMEDAYVCIDNFTSEDGVENSNDGPSAFYGVFDGHGGKHAAEFARCYLPKFVVEDEGFPTDIERVIASAFLQTDAAFEEACSSDAALASGTTALAALVLGRLDVVFKVFSTRRSLVVANAGDCRAVLSRRGKAIEMSRDHKPICIRERARIEASGGYIYDGYLNGQLNVARALGDWHMEGMKGGEGGPLSAEPEVMLIKLTEEDEFLVIGCDGMWDVFRSQNAVDFARRRLQEHNDPALCSKELVEEALKRKSGDNLAVVVVCFQSSPPPNLATPRRRVRRSFSAEGLRELAKLSG | 386 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 35110645 | 35112850 | - | Bda000080.1 | Bda13g01275 | 19406 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda13g01275 | 386 | ProSiteProfiles | PPM-type phosphatase domain profile. | 79 | 354 | IPR001932 | - | |
| Bda13g01275 | 386 | PANTHER | PROTEIN PHOSPHATASE 2C | 52 | 375 | IPR015655 | GO:0004722|GO:0006470 | |
| Bda13g01275 | 386 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Bda13g01275 | 386 | SUPERFAMILY | PP2C-like | 73 | 355 | IPR036457 | - | |
| Bda13g01275 | 386 | CDD | PP2Cc | 78 | 354 | IPR001932 | - | |
| Bda13g01275 | 386 | ProSitePatterns | PPM-type phosphatase domain signature. | 118 | 126 | IPR000222 | GO:0043169 | |
| Bda13g01275 | 386 | SMART | PP2C_4 | 69 | 352 | IPR001932 | - | |
| Bda13g01275 | 386 | Pfam | Protein phosphatase 2C | 80 | 346 | IPR001932 | - | |
| Bda13g01275 | 386 | Gene3D | - | 58 | 358 | IPR036457 | - | |
| Bda13g01275 | 386 | PANTHER | PROTEIN PHOSPHATASE 2C 27-RELATED | 52 | 375 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda03g00105 | Bda13g01275 | CCT | |
| Bda03g00105 | Bda13g01275 | ECH | |
| Bda01g01016 | Bda13g01275 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g01016 | Bda-Chr1:43708717 | Bda13g01275 | Bda-Chr13:35110645 | 1.19E-38 | dispersed | |
| Bda01g01974 | Bda-Chr1:56115802 | Bda13g01275 | Bda-Chr13:35110645 | 2.56E-110 | dispersed | |
| Bda02g00336 | Bda-Chr2:43621997 | Bda13g01275 | Bda-Chr13:35110645 | 5.38E-114 | dispersed | |
| Bda03g00327 | Bda-Chr3:2778851 | Bda13g01275 | Bda-Chr13:35110645 | 3.46E-114 | dispersed | |
| Bda11g00979 | Bda-Chr11:9516047 | Bda13g01275 | Bda-Chr13:35110645 | 5.03E-112 | dispersed | |
| Bda12g00106 | Bda-Chr12:854926 | Bda13g01275 | Bda-Chr13:35110645 | 7.31E-77 | dispersed | |
| Bda13g00231 | Bda-Chr13:2890588 | Bda13g01275 | Bda-Chr13:35110645 | 1.14E-67 | dispersed | |
| Bda06g00816 | Bda-Chr6:11414284 | Bda13g01275 | Bda-Chr13:35110645 | 7.32E-33 | transposed | |
| Bda01g00986 | Bda-Chr1:43467643 | Bda13g01275 | Bda-Chr13:35110645 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda13g01275 | K14803 | - | pvy:116115722 | 535.028 |