Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01275 ATGGAAGGCAGTAAAGACTGTAATGTTGACAATGGGAGCTGCTCCAAGGAGGGTCTGCCTCCGAATCCTATTCCGGCGGCTCATCGGCAATGTATTACCTCTGATGTTGCTCAAACACCGTGTAAGAAATCACTCGTACGCCACCAATCTCTGATGACGACCGAGGTGATAGAAGTCACCAACGAACCTGAATTTAACAAAGATGACCTTGACTCTAACTTTATTCCAATTGTTCGATCCGGAGCATCCGCCAACATTGGGTGTCGTAGCAGCATGGAAGATGCATATGTTTGCATCGACAACTTTACGAGTGAAGATGGGGTTGAAAATTCTAACGATGGGCCTAGTGCTTTTTATGGGGTTTTCGATGGGCATGGAGGAAAGCATGCTGCCGAGTTTGCTCGTTGCTATTTACCGAAATTTGTAGTCGAGGATGAAGGTTTCCCTACGGATATTGAGAGGGTTATTGCTTCGGCATTTTTACAAACGGATGCAGCCTTTGAAGAAGCATGTTCCTCCGATGCAGCCCTTGCATCTGGCACAACAGCTTTGGCTGCACTTGTCCTAGGAAGGTTAGATGTTGTGTTCAAAGTTTTTTCTACCCGTAGGTCATTGGTGGTAGCAAATGCTGGAGACTGCCGAGCGGTGCTGAGTCGCCGTGGCAAAGCCATCGAAATGTCAAGGGACCACAAGCCCATTTGCATCAGAGAGAGGGCCCGCATAGAGGCATCCGGAGGATATATTTACGATGGTTATCTTAACGGACAGCTTAACGTGGCACGAGCATTGGGAGACTGGCACATGGAAGGAATGAAGGGTGGAGAAGGCGGGCCTCTAAGTGCCGAGCCTGAGGTCATGTTGATAAAACTAACGGAGGAAGATGAGTTTCTCGTAATAGGATGTGATGGAATGTGGGATGTATTCAGGAGCCAAAATGCTGTCGATTTTGCCAGACGGAGGCTGCAAGAGCATAACGACCCGGCCTTGTGCAGCAAGGAATTGGTCGAGGAGGCTTTGAAGAGAAAGAGTGGGGACAATTTGGCTGTGGTTGTGGTCTGTTTCCAAAGCAGTCCTCCGCCCAATTTGGCCACTCCTAGAAGGAGAGTGCGGCGGAGCTTTTCAGCTGAAGGGTTGAGGGAGCTTGCAAAGCTTTCTGGATAG 1161 49.1 MEGSKDCNVDNGSCSKEGLPPNPIPAAHRQCITSDVAQTPCKKSLVRHQSLMTTEVIEVTNEPEFNKDDLDSNFIPIVRSGASANIGCRSSMEDAYVCIDNFTSEDGVENSNDGPSAFYGVFDGHGGKHAAEFARCYLPKFVVEDEGFPTDIERVIASAFLQTDAAFEEACSSDAALASGTTALAALVLGRLDVVFKVFSTRRSLVVANAGDCRAVLSRRGKAIEMSRDHKPICIRERARIEASGGYIYDGYLNGQLNVARALGDWHMEGMKGGEGGPLSAEPEVMLIKLTEEDEFLVIGCDGMWDVFRSQNAVDFARRRLQEHNDPALCSKELVEEALKRKSGDNLAVVVVCFQSSPPPNLATPRRRVRRSFSAEGLRELAKLSG 386
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
13 35110645 35112850 - Bda000080.1 Bda13g01275 19406
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01275 386 ProSiteProfiles PPM-type phosphatase domain profile. 79 354 IPR001932 -
Bda13g01275 386 PANTHER PROTEIN PHOSPHATASE 2C 52 375 IPR015655 GO:0004722|GO:0006470
Bda13g01275 386 MobiDBLite consensus disorder prediction 1 20 - -
Bda13g01275 386 SUPERFAMILY PP2C-like 73 355 IPR036457 -
Bda13g01275 386 CDD PP2Cc 78 354 IPR001932 -
Bda13g01275 386 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Bda13g01275 386 SMART PP2C_4 69 352 IPR001932 -
Bda13g01275 386 Pfam Protein phosphatase 2C 80 346 IPR001932 -
Bda13g01275 386 Gene3D - 58 358 IPR036457 -
Bda13g01275 386 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 52 375 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bda03g00105 Bda13g01275 CCT
Bda03g00105 Bda13g01275 ECH
Bda01g01016 Bda13g01275 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01016 Bda-Chr1:43708717 Bda13g01275 Bda-Chr13:35110645 1.19E-38 dispersed
Bda01g01974 Bda-Chr1:56115802 Bda13g01275 Bda-Chr13:35110645 2.56E-110 dispersed
Bda02g00336 Bda-Chr2:43621997 Bda13g01275 Bda-Chr13:35110645 5.38E-114 dispersed
Bda03g00327 Bda-Chr3:2778851 Bda13g01275 Bda-Chr13:35110645 3.46E-114 dispersed
Bda11g00979 Bda-Chr11:9516047 Bda13g01275 Bda-Chr13:35110645 5.03E-112 dispersed
Bda12g00106 Bda-Chr12:854926 Bda13g01275 Bda-Chr13:35110645 7.31E-77 dispersed
Bda13g00231 Bda-Chr13:2890588 Bda13g01275 Bda-Chr13:35110645 1.14E-67 dispersed
Bda06g00816 Bda-Chr6:11414284 Bda13g01275 Bda-Chr13:35110645 7.32E-33 transposed
Bda01g00986 Bda-Chr1:43467643 Bda13g01275 Bda-Chr13:35110645 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01275 K14803 - pvy:116115722 535.028