Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01286 ATGTCCTCGCCAGACCTCTCTCCAACTACACGAGACCCAGACGTAACCCCTCATCCCCTGTCTCCGTCCACTTTTCCGGGCAAAGTAGCGGACGTCTTCAAATCCAATCTGGTTTTCCGGTCCAAATGGGGTGAAATTAATGGGGCTATGGGCGATTTAGGGACCTATATTCCTATCGTGTTGGCTTTGACGCTCTCGAAGGACCTTAACTTAGGCACTACGCTGATTTTCACAGGTATTTACAACATCATCACCGGCGTTGTCTACGGCGTTCCGATGCCTGTCCAGCCGATGAAATCAGTCGCCGCTGTTGCCTTATCTACTGCCGATTTCGGTATCCCGGAGATCATGGCCGCCGGAATACTAACGGGAGGGACACTGATTTTACTGGGGGTCACCGGTTTGATGGAGCTCGCCTACTGGCTGATTCCTTTGCCTGTTGTTAGGGGGATTCAGCTAGCTCAAGGCTTATCTTTTGCACTAACTGCTGTTAGATACGTTCGTTATGACCAAAATATGGCGAAGTCAAAATCTCTCGATTACAGGGAGTGGTTCGGTTTGGACGGGCTGGTTTTGGCTCTCTTTTGTGCTTGTTTTGTTGTTATTGTTAATGGAGCAGGCGAAGAAAACCACGGCGAAGAATCGGAGGCTGACAGAGGAGGGCGATTTAGAAGATCAACGGCCAGATTGAGGAAACTCATATACTCACTCCCTTCAGCCTTTCTTATATTTTTGCTGGGTCTTGTTTTGGCATTTATAAGGAAGCCTAATATGGTGAAAGACGTCACCTTTGGCCCATCTTCCATTGATATTGTGAAGATATCAAAACATGCATGGAAGGATGGGTTCATAAAGGGGACAATCCCTCAGCTCCCTCTCTCAATTTTGAATTCCGTGATTGCTGTTTGCAAATTGTCGTCTGATTTGTTTCCAGGCAGGGACTTTTCAGCTACTTCGTTGTCGGTGACTGTCGGGCTGATGAACGTGATAGGGTGTTGGTTTGGGGCCTTGCCGACGTGCCATGGTGCTGGTGGGCTAGCCGGACAGTACAAGTTTGGGGGAAGAAGTGGTGGGTGCGTGGCGATTCTTGGCGCATCCAAAACGACACTTGGTTTGGTTTTGGGTAGTTCTTTGGTGGTGATTCTGAGGCATTTTCCGGTAGGAATTCTGGGGATTTTGCTACTTTTCGCCGGAGTGGAGCTTGCTATGGCTTCCAGAGACATGACCAGTAAAGAGCAGTCGTTTGTGCTGCTCATTTGCACGGCAGTCTCACTCGTAGGCTCAAGCGCTGGGCTTGGTTTCTTGTGTGGGATGAAAATGCATGTTAAGGCCGCACAATCCGCATTTAGGGATCGGACACAGGAATTCCAGAGTGTTGCAGAGAGGCTGAAGAAGCCATTTTCATCATCTTCTGAGCAAAATGGACATAGTAATGCTTTGAAATTAAAGGATCAACGATCTGCAGTTGCAATTCAGTCTGAATTTAATAGAAGAGCTTCTAAAATCGGCTATGGAATACATCAGACATCGCAAAAACTTTCAAAGCTGGCCAAGTTGGCAAAAAGGACTTCAGTTTTTGATGATCCTACGGTGGAAATTCAGGAATTGACGGCAGTTATAAAGCAAGATATTACTGCATTGAACTCCGCAGTTGTAGACCTTCAGCTGCTTTCTCATTCCAGAAATGAGACCGGGATTATTTCCAGGGACACAACTAGTCATTCAACCACTGTTGTAGATGACCTGAAGAATAGGCTAATGAGTGCTACAAAGGAATTCAAAGAAGTCCTCACCATGCGAACAGAGAACTTGAAGGTTCATGAAAACAGAAGACAATTGTTTTCTTCCACTGCCTCCAAAGATTCTGCCGACCCTTTTGTTCGTCAGCGTCCATTAGTTTCCAGGTCAGCAGCTAGTCCATCGAATGCACCTCCTCCTCCATGGGCAAATGGGTCAGCATCTTCATCCCAATCAAAACATATGTGGTTCCACCACGTTGTTTTTAGTTTCTTATGTAACAATAATATATGTTTAAGAAATTTCTACGACAGAAAGCAGGCAGATGGGGAAAGTCAGCCACTTCTGCAGCAGCAACAGCAACAACAACAACAGCAGTTAGTTCCGTTGCAAGACAGTTACATGCAGAGCAGAGCTGAAGCTCTTCAAAATGTTGAGTCTACTATTCATGAGTTGAGCAGCATTTTCAACCAACTTGCAACCCTTGTTTCCCAGCAAGGAGAGATTGCCATAAGAATTGATGAGAACATGGATGACACGTTGGCGAATGTCGAGGGAGCGCAGGGAGCTCTGCTCAAGTATTTGAACAGCATATCTTCGAATAGGTGGCTGATGATAAAAATTTTCTTCTTATTAATATTTTTCCTGATGATTTTCCTATTTTTTGTGGCCTAG 2412 45.81 MSSPDLSPTTRDPDVTPHPLSPSTFPGKVADVFKSNLVFRSKWGEINGAMGDLGTYIPIVLALTLSKDLNLGTTLIFTGIYNIITGVVYGVPMPVQPMKSVAAVALSTADFGIPEIMAAGILTGGTLILLGVTGLMELAYWLIPLPVVRGIQLAQGLSFALTAVRYVRYDQNMAKSKSLDYREWFGLDGLVLALFCACFVVIVNGAGEENHGEESEADRGGRFRRSTARLRKLIYSLPSAFLIFLLGLVLAFIRKPNMVKDVTFGPSSIDIVKISKHAWKDGFIKGTIPQLPLSILNSVIAVCKLSSDLFPGRDFSATSLSVTVGLMNVIGCWFGALPTCHGAGGLAGQYKFGGRSGGCVAILGASKTTLGLVLGSSLVVILRHFPVGILGILLLFAGVELAMASRDMTSKEQSFVLLICTAVSLVGSSAGLGFLCGMKMHVKAAQSAFRDRTQEFQSVAERLKKPFSSSSEQNGHSNALKLKDQRSAVAIQSEFNRRASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTVEIQELTAVIKQDITALNSAVVDLQLLSHSRNETGIISRDTTSHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHENRRQLFSSTASKDSADPFVRQRPLVSRSAASPSNAPPPPWANGSASSSQSKHMWFHHVVFSFLCNNNICLRNFYDRKQADGESQPLLQQQQQQQQQQLVPLQDSYMQSRAEALQNVESTIHELSSIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFLLIFFLMIFLFFVA 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 35174025 35178601 - Bda000093.2 Bda13g01286 19417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01286 803 SUPERFAMILY t-snare proteins 493 766 IPR010989 GO:0016020|GO:0016192
Bda13g01286 803 CDD SNARE_syntaxin5 714 784 - -
Bda13g01286 803 SMART tSNARE_6 706 773 IPR000727 -
Bda13g01286 803 MobiDBLite consensus disorder prediction 633 655 - -
Bda13g01286 803 MobiDBLite consensus disorder prediction 1 23 - -
Bda13g01286 803 Gene3D - 488 766 - -
Bda13g01286 803 PANTHER - 31 442 IPR031563 GO:0015098|GO:0015689
Bda13g01286 803 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 449 465 IPR021538 -
Bda13g01286 803 Pfam SNARE domain 747 799 IPR000727 -
Bda13g01286 803 ProSitePatterns Syntaxin / epimorphin family signature. 717 756 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bda13g01286 803 PANTHER MOLYBDATE TRANSPORTER 1/2-RELATED 31 442 - -
Bda13g01286 803 MobiDBLite consensus disorder prediction 1 17 - -
Bda13g01286 803 Pfam Molybdate transporter of MFS superfamily 283 401 IPR031563 GO:0015098|GO:0015689
Bda13g01286 803 Pfam Molybdate transporter of MFS superfamily 44 159 IPR031563 GO:0015098|GO:0015689
Bda13g01286 803 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 711 773 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00459 Bda-Chr4:52899992 Bda13g01286 Bda-Chr13:35174025 0 dispersed
Bda04g00839 Bda-Chr4:58222155 Bda13g01286 Bda-Chr13:35174025 6.94E-164 dispersed
Bda01g00978 Bda-Chr1:43390432 Bda13g01286 Bda-Chr13:35174025 2.92E-180 transposed
Bda14g00262 Bda-Chr14:1802621 Bda13g01286 Bda-Chr13:35174025 1.53E-49 transposed
Bda01g00977 Bda-Chr1:43368414 Bda13g01286 Bda-Chr13:35174025 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01286 - - cit:102626597 620.928