Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01294 GAGCGCATACCAATTGAGGAAGTGTTTGAGCAGTTGAAATGTTCACGAGAAGGTTTAACGACAGAGGAAGGAGGCAACCGGCTTCAAGTCTTTGGACCCAACAAACTAGAAGAGAAGAAGGAGAGCAAATTTCTCAAGTTTTTAGGCTTCATGTGGAATCCTTTATCTTGGGTCATGGAAGCTGCTGCTCTGATGGCTATAGCGCTCGCCAACGGCGACGGCAGACCTCCGGACTGGCAGGATTTTGTCGGAATCATTGTTCTACTCCTTATAAACTCAACCATCAGTTTCATTGAAGAAAACAATGCTGGAAATGCTGCAGCAGCCTTGATGGCTGGTCTTGCACCAAAGACTAAGGTTCTTAGAGATGGACGCTGGAGTGAGCAAGATGCGGCCATTCTTGTCCCAGGAGATATAATCAGCATCAAGCTAGGAGATATAATTCCGGCGGACGCCCGACTTCTCGAGGGCGATCCTCTGAAAATCGATCAATCTGCTCTGACCGGAGAATCCCTTCCCGTCACTAAGAATCCATCAGACGAAGTATTTTCTGGCTCAACGTGCAAACAAGGTGAAATTGAAGCAGTTGTGATTGCCACTGGTGTGCACACCTTCTTTGGCAAAGCTGCCCACTTGGTCGACAGCACCAATCAAGTTGGTCATTTCCAGAAAGTTCTTACCGCCATTGGTAACTTCTGTATTTGCTCCATTGCTGTTGGGATAGTAATTGAGATCATAGTGATGTACCCTATACAGAAGCGTAAATACAGGGATGGTATCGACAATTTGCTAGTTCTTTTGATTGGTGGAATCCCTATTGCCATGCCCACTGTCTTGTCTGTCACTATGGCTATTGGCTCTCACAGGCTCTCTCAGCAGGGCGCTATTACGAAAAGAATGACTGCCATAGAGGAAATGGCGGGCATGGATGTCCTTTGTAGTGACAAGACTGGAACTCTAACCTTAAACAAGTTAACTGTCGATAGCAGCTTGATCGAAGTGTTTGCTAAAGGTGTCGAAAAAGACTGTGTGATTCTTTTGGCAGCAAGAGCTTCTAGGATTGAAAATCAAGATGCCATCGATGCTGCCATTGTCGGAATGCTTGCAGATCCCAAAGAGGCCCGAGCCGACGTTAAGGAGGTTCATTTTCTTCCTTTCAATCCCGTCGATAAGAGGACTGCACTAACGTACATTGACTCGGATGGAAATTGGCACCGAGCTAGCAAAGGTGCTCCTGAACAGATTCTAAATCTTTGCAACTGTAAGGAAGATGTTAGAAGAAAGGTTCATGCAGTGATCGATAAGTTTGCTGAGCGGGGACTTCGATCTTTAGCCGTTGCAAGACAGGAAGTGCCTGAGAGATCGAAAGATGGTTCTGGGGCTCCATGGGAGTTTGTTGGGTTATTGTCTCTATTTGATCCTCCGCGACATGATAGTGCCGAAACGATTAGAAGAGCTCTGAATCTCGGAGTGAATGTCAAGATGATTACTGGTAACTGTCAAAATTTGATGAATTTTCCTTTATTTTTGTTTGTCTTTAAGTTAAATTTGAATGTCATCTCTCATGATACAGGTGATCAACTTGCCATTGCCAAGGAAACCGGTCGACGTCTCGGAATGGGAACTAACATGTATCCTTCGTCTTCATTACTCGGTCAAGACAAGGATGCATCCATTGCCGCTCTTCCTGTGGATGAGCTGATCGAAAAGGCCGATGGGTTTGCCGGAGTATTTCCAGAGCACAAATATGAAATTGTCAAAAGGCTACAGGATAGAAAACACATTTGTGGAATGACGGGAGATGGTGTTAACGACGCACCTGCATTGAAAAGGGCCGACATCGGAATTGCTGTTGCTGATGCTACTGATGCAGCTAGGAGTGCGTCGGATATTGTCCTTACCGAGCCAGGACTGAGCGTTATCGTCAGTGCAGTGCTAACCAGCAGGGCTATTTTCCAAAGGATGAAGAACTACACTATTTACGCAGTTTCGATCACCATTCGTATAGTGTTTGGTTTTATGTTCATTGCTTTGATTTGGAGGTTCGACTTTGCGCCCTTCATGGTTTTAATCATAGCCATTCTAAATGATGGAACAATCATGACGATTTCGAAAGATCGCGTTAAGCCATCTCCACAGCCCGACAGTTGGAAATTGAAAGAGATTTTCGCCACAGGAATTTTGCTGGGTGGATACTTAGCATTAATGACAGTCATATTCTTTTGGGCTATGAACGATACCGACTTTTTCACTGACAAGTTCAATGTCAGATCAATTAGGACTAGCCGCGATGAAAAGATGGCGGCATTGTACCTGCAAGTGAGTATAGTGAGCCAGGCTCTTATTTTCGTGACGAGATCTCGCAGCTGGTCCTACGCTGAACGTCCGGGACTTCTTTTAGTCGGTGCTTTCATAATTGCTCAGTTGGTGGCGACGCTAATAGCGGTGTATGCGAATTGGGGTTTTGCTCGAATAAAAGGAATGGGCTGGGGCTGGGCTGGCGTGATCTGGCTTTATAGCGTGATTACGTATATCCCGCTCGATTTTCTGAAATTTGCGATTCGTTATGTGCTCAGTGGGAAGGCTTGGGATACTCTTTTGGAGAAAAAGACTGCCTTCACGTCAAAGAAAGACTATGGCAAAGAAGATAGACAAGCACAATGGGCGGCTGCACAAAGAACCTTACATGGCCTTCAACCGCCTGCCCCGACTAGCCTTTTCACAGACAAAAGTAGTTATAGGGAACTTTCCGAGATTGCCGAGCAAGCCAAGCGACGAGCTGAAGTTGCAAGGAGGCTCCGAGAATTGAATACGCTCAAGGGTCACGTTGAATCTGTTGTAAAGCTTAAAGGATTGGATATTGATACAATTCAACAACACTACACAGTTTAA 2892 45.47 ERIPIEEVFEQLKCSREGLTTEEGGNRLQVFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAALMAIALANGDGRPPDWQDFVGIIVLLLINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVIEIIVMYPIQKRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDSSLIEVFAKGVEKDCVILLAARASRIENQDAIDAAIVGMLADPKEARADVKEVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILNLCNCKEDVRRKVHAVIDKFAERGLRSLAVARQEVPERSKDGSGAPWEFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGNCQNLMNFPLFLFVFKLNLNVISHDTGDQLAIAKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGILLGGYLALMTVIFFWAMNDTDFFTDKFNVRSIRTSRDEKMAALYLQVSIVSQALIFVTRSRSWSYAERPGLLLVGAFIIAQLVATLIAVYANWGFARIKGMGWGWAGVIWLYSVITYIPLDFLKFAIRYVLSGKAWDTLLEKKTAFTSKKDYGKEDRQAQWAAAQRTLHGLQPPAPTSLFTDKSSYRELSEIAEQAKRRAEVARRLRELNTLKGHVESVVKLKGLDIDTIQQHYTV 963
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 35220963 35224940 + Bda000101.1 Bda13g01294 19425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01294 963 Pfam E1-E2 ATPase 115 292 - -
Bda13g01294 963 Gene3D - 637 826 - -
Bda13g01294 963 CDD P-type_ATPase_H 18 852 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bda13g01294 963 PANTHER CALCIUM-TRANSPORTING ATPASE 516 943 - -
Bda13g01294 963 Gene3D - 116 200 - -
Bda13g01294 963 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 858 IPR023298 -
Bda13g01294 963 Gene3D - 78 309 - -
Bda13g01294 963 PANTHER PLASMA MEMBRANE ATPASE 1 499 - -
Bda13g01294 963 Gene3D - 310 500 IPR023214 -
Bda13g01294 963 Gene3D - 911 963 - -
Bda13g01294 963 Gene3D - 325 472 IPR023299 GO:0000166
Bda13g01294 963 Pfam haloacid dehalogenase-like hydrolase 309 613 - -
Bda13g01294 963 PRINTS P-type cation-transporting ATPase superfamily signature 313 327 - -
Bda13g01294 963 PRINTS P-type cation-transporting ATPase superfamily signature 489 499 - -
Bda13g01294 963 PRINTS P-type cation-transporting ATPase superfamily signature 163 177 - -
Bda13g01294 963 PRINTS P-type cation-transporting ATPase superfamily signature 622 634 - -
Bda13g01294 963 PRINTS P-type cation-transporting ATPase superfamily signature 599 618 - -
Bda13g01294 963 PRINTS P-type cation-transporting ATPase superfamily signature 467 478 - -
Bda13g01294 963 PRINTS H+-transporting ATPase (proton pump) signature 429 447 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda13g01294 963 PRINTS H+-transporting ATPase (proton pump) signature 771 792 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda13g01294 963 SMART Cation_ATPase_N_a_2 1 71 IPR004014 -
Bda13g01294 963 Gene3D - 524 636 IPR023214 -
Bda13g01294 963 Pfam Cation transporter/ATPase, N-terminus 3 65 IPR004014 -
Bda13g01294 963 PANTHER CALCIUM-TRANSPORTING ATPASE 1 499 - -
Bda13g01294 963 PANTHER PLASMA MEMBRANE ATPASE 516 943 - -
Bda13g01294 963 SUPERFAMILY Calcium ATPase, transduction domain A 116 213 IPR008250 -
Bda13g01294 963 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 85 331 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda13g01294 963 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 574 689 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda13g01294 963 SUPERFAMILY HAD-like 309 646 IPR036412 -
Bda13g01294 963 ProSitePatterns E1-E2 ATPases phosphorylation site. 315 321 IPR018303 -
Bda13g01294 963 Coils Coil 913 933 - -
Bda13g01294 963 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 18 499 IPR006534 GO:0008553|GO:0016021|GO:0120029
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00970 Bda-Chr9:38857369 Bda13g01294 Bda-Chr13:35220963 0 dispersed
Bda11g00095 Bda-Chr11:1127918 Bda13g01294 Bda-Chr13:35220963 0 dispersed
Bda11g01685 Bda-Chr11:50986235 Bda13g01294 Bda-Chr13:35220963 0 dispersed
Bda12g01038 Bda-Chr12:42144994 Bda13g01294 Bda-Chr13:35220963 0 dispersed
Bda13g01294 Bda-Chr13:35220963 Bda13g01304 Bda-Chr13:35257673 0 dispersed
Bda13g01294 Bda-Chr13:35220963 Bda03g00039 Bda-Chr3:511302 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01294 K01535 - mnt:21385870 1652.88