Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01302 ATGGCTTTGCAGCTCTTTGTCTCTCCAAAGATGGACAATACGGCGGCTTCACAGGAAGCTGCATCGCAAGGACTGAACAGAGCGGAGCACCTGATCCGCCTCTTCTCTGATCGCCAGCGACAACCTCAAAACTCTGATCACTCTGATTTTAACGATCTCACTGACCTCGCAGTTTCCGACTTTAGGAAAGTCATTTCCCTTCTTAATCGGACTGGCCATGCTCGGTTCAGGCGCGGTCCGATCCAGTCGTCTCCTTCATCTTCTTCGTCTACCTCTTCGGCGTCTCTGGATCCAGCTCAAGCCTTATCCTTAGCCACTGGATTTCCATCTCCGGTCGCTCCTGTAGCGGCTGCGGCCCAGCCTCCACCTTCTGCCCTGTCTGGCTTCGTCCAATTTCCGACGCAGGCGATGACGCTCGACTTCAGAAAAGCTAATAATTTGAACTCGAACAACCAAGAAAGCACGAATCTGGAGCTAACGAAGGATACCTTCAGCGTTTCATCCAGCTCCTCGTTCGTGTCGTCGGCTCTTACTGGAGACGGCAGCGTATCTAATGGAAAACTTGGATCGTCAATCTTTTTGGCTCCAGCGCCGGCATCCTCCGGGGGTAAGCCCCCTCTGTCATCTGTCCCGTACAAGAAGAGATGTCGCGATCACTCGGACAACTTCTCCAGCAAAGCCTCTGGCGATTGCCACTGCTCTAAGAGAAGGAAAAACCGCGTGAATGAAACTATCAGAGTTCCGGCGATAAGCTCGAAAATCGCCGATATTCCAGCCGACGACCACTCGTGGAGAAAGTACGGTCAAAAGCCAATCAAGGGCTCACCTTACCCTCGGGGATACTATAAATGTAGTACGGTACGAGGGTGTCCAGCTAGGAAACACGTGGAGAGGGACCCAGATGATCCGACGATGCTGATTGTAAGATACGAGGGGGAGCACCGACACGGCCTGCCCGCGATGCAGGAGAACGTGGGCGGTCCAAGTCCAACAAATGAAGAAACGCTCTCTTAG 1014 53.06 MALQLFVSPKMDNTAASQEAASQGLNRAEHLIRLFSDRQRQPQNSDHSDFNDLTDLAVSDFRKVISLLNRTGHARFRRGPIQSSPSSSSSTSSASLDPAQALSLATGFPSPVAPVAAAAQPPPSALSGFVQFPTQAMTLDFRKANNLNSNNQESTNLELTKDTFSVSSSSSFVSSALTGDGSVSNGKLGSSIFLAPAPASSGGKPPLSSVPYKKRCRDHSDNFSSKASGDCHCSKRRKNRVNETIRVPAISSKIADIPADDHSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERDPDDPTMLIVRYEGEHRHGLPAMQENVGGPSPTNEETLS 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 35252857 35254056 - Bda000110.1 Bda13g01302 19433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01302 337 SUPERFAMILY WRKY DNA-binding domain 256 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda13g01302 337 PANTHER WRKY TRANSCRIPTION FACTOR 17-RELATED 7 325 - -
Bda13g01302 337 Gene3D WRKY domain 245 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda13g01302 337 MobiDBLite consensus disorder prediction 80 95 - -
Bda13g01302 337 MobiDBLite consensus disorder prediction 314 337 - -
Bda13g01302 337 Pfam Plant zinc cluster domain 213 256 IPR018872 -
Bda13g01302 337 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 7 325 IPR044810 GO:0003700
Bda13g01302 337 Pfam WRKY DNA -binding domain 260 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda13g01302 337 ProSiteProfiles WRKY domain profile. 253 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda13g01302 337 SMART WRKY_cls 258 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda13g01302 337 MobiDBLite consensus disorder prediction 76 95 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01344 Bda13g01302 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00526 Bda-Chr4:53886332 Bda13g01302 Bda-Chr13:35252857 2.82E-51 dispersed
Bda13g01302 Bda-Chr13:35252857 Bda11g00236 Bda-Chr11:2806716 7.49E-28 dispersed
Bda03g00205 Bda-Chr3:1615820 Bda13g01302 Bda-Chr13:35252857 1.15E-39 transposed
Bda01g00700 Bda-Chr1:34258875 Bda13g01302 Bda-Chr13:35252857 3.96E-110 wgd
Bda13g01302 Bda-Chr13:35252857 Bda03g00035 Bda-Chr3:499383 3.87E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16928 PF03106 WRKY 2.10E-24 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01302 - - jre:109009561 375.555