Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01304 ATGGCTGACATTTCCTTGGAGGACGTGAAAAATGAGAACGTTGATCTTGAGCGGATTCCGATCGAGGAAGTCTTCGAGCAGCTCAAATGTACAAGAGAAGGTTTGACGAACAATGAAGGTGAGAAAAGACTTGGAATTTTCGGTCCGAACAAGCTTGAGGAGAAAAAGGAGGGGAAGCCGCCGGACTGGCAAGACTTCATCGGAATTGTGGTGTTGCTCATCATCAACTCAACCATCAGCTTCATCGAGGAGAACAACGCTGGCAATGCCGCGGCTGCTCTCATGGCAGGTCTTGCGCCAAAGACGAAGGTTTTGAGGGATGGAAAATGGACTGAGCAAGAGGCGTCAATTCTGGTTCCCGGAGATGTGATCAGCATCAAGCTGGGAGATATCGTCCCGGCCGATGCTCGTCTTCTCGAAGGGGACCCTCTTAAGATCGACCAATCTGCCCTCACCGGTGAGTCTTTACCCGTCACCAAGCACCCCGGCGATGAGGTCTTCTCCGGCTCCACCTGCAAGCAGGGTGAGATCGAGGCTATCGTCATTGCCACCGGAGTCCATACCTTCTTCGGAAAGGCTGCTCATCTCGTCGATAGCACAAACCAAGTTGGTCATTTCCAAAAGGTGTTGACTGCCATTGGTAACTTCTGTATCTGCTCAATTGCGGTCGGAATGGTTATCGAGATCGTAGTGATGTTCCCAATTCAGAATAGAAGATATAGAGAGGGAATTGATAACTTGTTGGTGCTTCTCATCGGAGGTATTCCGATTGCCATGCCGACCGTCTTGTCCGTAACTATGGCTATTGGCTCCCACCGCCTTTCCGAGCAAGGGGCTATTACAAAGAGAATGACAGCCATTGAAGAGATGGCCGGAATGGATGTTCTCTGCAGTGACAAAACCGGGACACTTACGCTCAACAAACTTACAGTCGACAAGACCCTCATCGAGGTATTCACGGAGGGTACCGATAAAGACACCGTCGTCTTGCTGGCTGCCAGGGCTTCGAGGGTCGAAAACCAGGACGCCATTGATGCCTGCATCGTTGGAATGTTGGGTGATCCTAGAGAGGCTAGAGCCGGAATCACCGAAGTGCATTTCCTGCCGTTCAATCCAGTCGATAAGCGCACAGCCATCACATACGTTGACAGTGAAGGAAACTGGCACAGAAGCAGCAAGGGAGCTCCTGAGCAGATTATCGATCTCTGTGATCTGAAGGGAGATGTCAGAAAGAAGGCTCATCTTGTGATCGACAGCTACGCCGAGCGTGGTCTTCGTTCCCTCGCCGTCGCTCAACAGACAGTTTCCGAGAAGACAAAGGAGAGCGAGGGAGATAAATGGGAGTTCATTGGTCTCTTGCCCTTATTTGACCCACCAAGGCATGACAGTGCGGAGACAATCCGACGGGCCCTTGAACTTGGCGTTAACGTCAAAATGATCACCGGTGACCAACTCGCCATCGGAAAAGAAACCGGACGGCGACTTGGGATGGGTACAAACATGTATCCTTCATCCTCCCTGCTCGGTCAAAGCAAGGACGAGACTATTGCTTCCATTCCCGTCAACGAGCTCATCGAGAAGGCCGATGGATTCGCCGGCGTCTTCCCAGAACACAAATACGAAATCGTTAAGAAGCTGCAAGAGATGAAGCACATTTGTGGAATGACCGGAGATGGAGTTAACGATGCTCCGGCGTTGAAGAAGGCCGACATCGGAATCGCCGTAGCTGACGCAACAGATGCTGCGAGAAGTGCATCGGACATTGTTCTGACGGAGCCGGGTTTGAGCGTGATCGTGAGTGCTGTGCTGACGAGCAGAGCCATTTTTCAGAGGATGAAAAATTATACCATTTACGCAGTATCCATCACTATCCGTATCGTGTTGGGGTTCATGCTCGTCGCCCTTCTCTGGAAATTCGACTTCTCGCCCTTCATGGTCTTGATCATCGCCATCTTGAACGACGGAACAATCATGACCATCTCTAAAGACAGAGTGAAGCCGTCGCCACTCCCCGACTCGTGGAAGCTCAAAGAAATCTTCGCCACTGGAGTTGTTCTCGGAACATACATGGCCGTCATGACAGTCGTCTTCTTCTGGCTCGCAAACGAAACTGAATTCTTCTCGGACACTTTTGGTGTAAGGTCGATCAAGGGTAGCCCGACTGAGCTTAACTCAGCTCTGTACCTTCAAGTGAGCATTATCAGTCAAGCTCTTATCTTCGTCACACGATCAAGGAGCTGGTCCTACGTAGAACGGCCGGGCGTCTTGCTCGTCGGAGCCTTCATTGCTGCACAGTCGGGCTGCAAATTCTTTATGCAGGTGGCTACTGTCATTGCAGTGTATGCCGGTTGGGAGTTTGCTAAGATTCAAGGCATTGGATGGGGATGGGCAGGAGTGATCTGGATCTACAGCGTCATCACTTACATCCCTCTCGACGTCCTCAAGTTCATCATCCGCTACGCGTTGAGCGGGAAGGCATGGGATAATCTGCTTCAAAACAAGACTGCTTTCACTACAAAGAAGGATTACGGAAAGGGAGAGAGGGAGGCTCAATGGGTGTTGGCTCAACGAACCCTTCACGGCCTCCAGGCGCCGGAAGTCCACTTCCACGACAAGAACATCCACCTCGACCACTCCGACGTCGCCGACGAGGCCAAGAGACGCGCCGAAGTTGCTCGGTTGAGAGAACTGCATACTCTGAAGGGTCACGTTGAATCAGTCGTGAAGCTAAAGGGTTTGGACATTGAAACCATCCAACAGCATTACACTGTTTAA 2775 51.24 MADISLEDVKNENVDLERIPIEEVFEQLKCTREGLTNNEGEKRLGIFGPNKLEEKKEGKPPDWQDFIGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWTEQEASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMVIEIVVMFPIQNRRYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFTEGTDKDTVVLLAARASRVENQDAIDACIVGMLGDPREARAGITEVHFLPFNPVDKRTAITYVDSEGNWHRSSKGAPEQIIDLCDLKGDVRKKAHLVIDSYAERGLRSLAVAQQTVSEKTKESEGDKWEFIGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDETIASIPVNELIEKADGFAGVFPEHKYEIVKKLQEMKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALLWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGTYMAVMTVVFFWLANETEFFSDTFGVRSIKGSPTELNSALYLQVSIISQALIFVTRSRSWSYVERPGVLLVGAFIAAQSGCKFFMQVATVIAVYAGWEFAKIQGIGWGWAGVIWIYSVITYIPLDVLKFIIRYALSGKAWDNLLQNKTAFTTKKDYGKGEREAQWVLAQRTLHGLQAPEVHFHDKNIHLDHSDVADEAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 924
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 35257673 35261597 - Bda000112.1 Bda13g01304 19435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01304 924 PRINTS P-type cation-transporting ATPase superfamily signature 473 483 - -
Bda13g01304 924 PRINTS P-type cation-transporting ATPase superfamily signature 451 462 - -
Bda13g01304 924 PRINTS P-type cation-transporting ATPase superfamily signature 556 575 - -
Bda13g01304 924 PRINTS P-type cation-transporting ATPase superfamily signature 147 161 - -
Bda13g01304 924 PRINTS P-type cation-transporting ATPase superfamily signature 579 591 - -
Bda13g01304 924 PRINTS P-type cation-transporting ATPase superfamily signature 297 311 - -
Bda13g01304 924 PANTHER PLASMA MEMBRANE ATPASE 58 904 - -
Bda13g01304 924 Pfam haloacid dehalogenase-like hydrolase 293 570 - -
Bda13g01304 924 PANTHER CALCIUM-TRANSPORTING ATPASE 1 59 - -
Bda13g01304 924 ProSitePatterns E1-E2 ATPases phosphorylation site. 299 305 IPR018303 -
Bda13g01304 924 PRINTS H+-transporting ATPase (proton pump) signature 728 749 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda13g01304 924 PRINTS H+-transporting ATPase (proton pump) signature 556 572 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda13g01304 924 PRINTS H+-transporting ATPase (proton pump) signature 413 431 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda13g01304 924 PRINTS H+-transporting ATPase (proton pump) signature 587 612 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda13g01304 924 PRINTS H+-transporting ATPase (proton pump) signature 528 544 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda13g01304 924 SUPERFAMILY Calcium ATPase, transduction domain A 100 197 IPR008250 -
Bda13g01304 924 Pfam Cation transporter/ATPase, N-terminus 19 57 IPR004014 -
Bda13g01304 924 SMART Cation_ATPase_N_a_2 15 85 IPR004014 -
Bda13g01304 924 Gene3D - 875 924 - -
Bda13g01304 924 SFLD Haloacid Dehalogenase 279 608 - -
Bda13g01304 924 SUPERFAMILY HAD-like 293 603 IPR036412 -
Bda13g01304 924 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 62 769 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bda13g01304 924 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 822 IPR023298 -
Bda13g01304 924 CDD P-type_ATPase_H 34 816 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bda13g01304 924 Gene3D - 62 790 - -
Bda13g01304 924 Gene3D - 100 184 - -
Bda13g01304 924 Gene3D - 294 593 IPR023214 -
Bda13g01304 924 PANTHER CALCIUM-TRANSPORTING ATPASE 58 904 - -
Bda13g01304 924 PANTHER PLASMA MEMBRANE ATPASE 1 59 - -
Bda13g01304 924 SFLD p-type atpase 279 608 IPR044492 -
Bda13g01304 924 Gene3D - 309 456 IPR023299 GO:0000166
Bda13g01304 924 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 69 330 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda13g01304 924 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 531 637 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda13g01304 924 Pfam E1-E2 ATPase 99 276 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01294 Bda-Chr13:35220963 Bda13g01304 Bda-Chr13:35257673 0 dispersed
Bda14g01332 Bda-Chr14:15046308 Bda13g01304 Bda-Chr13:35257673 6.16E-52 dispersed
Bda13g01304 Bda-Chr13:35257673 Bda09g00970 Bda-Chr9:38857369 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01304 K01535 - mnt:21399903 1565.82