Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01334 ATGGCGAAAATAGCCCTGGGAACTACCCGAGAAGCCACCCAGCCTGACTGTATTAAAGCCCTCGTTGTTGAATTTATCACCACCTTTCTCTTCGTCTTCGCCGGTGTTGGAACAGCGATGGCCGCCGCAGATAAGCTTGGAGGAACTCCATTCTTGGGGTTGTTCGCAGTGGCGATAGCGCATGCACTTGTGGTGGCTGTAATGATATCCGGCGGCCATATTTCCGGTGGTCATCTCAATCCAGCCGTCACTCTCGGCCTACTCGTCGGTGGGCATATCAGCTTCTTCAGATCCGTTCTCTACTGGATCGATCAGTTGCTAGCATCAGCAGCAGCTTGTTATCTCCTTTCTTATCTCACCGGAGGACTGACAACTCCGATCCATTCACTGGCAAGTGGAGTCGACTACTTACAGGGTGTAATATGGGAGGTGGTATTAACATTTTCGTTGCTGTTCACTGTGTATGGAACGATAGTGGACCCGAAAAAAGGAGCAATTGATGGGCTGGGGCCAACGCTGACTGGGTTTGTGGTGGGAGCCAACATCTTAGCAGGAGGGGCCTTCTCCGGCGCTTCGATGAACCCAGCAAGATCCTTCGGCCCTGCGTTGGTGAGTTGGGACTGGACCGACCACTGGGTTTACTGGGTCGGCCCCCTCATCGGTGGAGGGCTTGCTGGGTTTGTCTATGAAAATTTCTTCATTCTTAGGTCTTCTCATCTACCTCTTGCCAGAGGAGACGATGATATCTACTGA 753 52.19 MAKIALGTTREATQPDCIKALVVEFITTFLFVFAGVGTAMAAADKLGGTPFLGLFAVAIAHALVVAVMISGGHISGGHLNPAVTLGLLVGGHISFFRSVLYWIDQLLASAAACYLLSYLTGGLTTPIHSLASGVDYLQGVIWEVVLTFSLLFTVYGTIVDPKKGAIDGLGPTLTGFVVGANILAGGAFSGASMNPARSFGPALVSWDWTDHWVYWVGPLIGGGLAGFVYENFFILRSSHLPLARGDDDIY 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 35622513 35623545 - Bda000145.1 Bda13g01334 19465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01334 250 Gene3D Glycerol uptake facilitator protein. 2 246 IPR023271 -
Bda13g01334 250 PANTHER AQUAPORIN-8 2 247 IPR034294 -
Bda13g01334 250 SUPERFAMILY Aquaporin-like 11 241 IPR023271 -
Bda13g01334 250 CDD MIP 19 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda13g01334 250 Pfam Major intrinsic protein 12 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda13g01334 250 ProSitePatterns MIP family signature. 78 86 IPR022357 -
Bda13g01334 250 PANTHER AQUAPORIN TIP4-1 2 247 - -
Bda13g01334 250 PRINTS Major intrinsic protein family signature 60 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda13g01334 250 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda13g01334 250 PRINTS Major intrinsic protein family signature 175 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda13g01334 250 PRINTS Major intrinsic protein family signature 212 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda13g01334 250 PRINTS Major intrinsic protein family signature 142 160 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda13g01334 250 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00601 Bda-Chr7:7353841 Bda13g01334 Bda-Chr13:35622513 5.24E-82 dispersed
Bda13g01334 Bda-Chr13:35622513 Bda01g00276 Bda-Chr1:27389525 4.95E-33 dispersed
Bda13g01334 Bda-Chr13:35622513 Bda05g01212 Bda-Chr5:60068461 1.82E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01334 K09873 - jre:109009497 409.068