Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01341 ATGCAGAACAACAGGATTTCAGGTGTTTTACCTCCTGGAATCTCGAGAGCAACTAATTTGGTGAAAATAGATCTCAGTAACAATCTCCTTTCTGGTCCAATACCTTCTGAAATTGGAAATTTAGAGAAGATAAATTTGCTACTGCTGCAAGGCAACAAGTTGAATTCCTCAATCCCCAAGTCGCTCTCTTTATTAAAATCTCTCAATGTTCTTGATCTTTCTAACAATCTCCTGACAGGCAATATTCCAGAAAGCCTTTCTGAATTGTTGCCTAACTCCGTTAACTTTTCAAACAACAAGCTTTATGGTCCAATACCTCTCTCTTTGATTAAAGGGGGTTTAGTAGAAAGCTTTTCAGGTAACCCAGGGCTTTGCGTCTCAGTCTATCAAGAGTCATCAGGTCAAAACTTCCCCATGTGTACACAAACTTACAACCGAAAGAGGCTTAGTTTCATCTGGGCAATTGTAGTTTCAATTGTAGTAACCTTTATTGGAGCTGCCCTGTTTCTAAAACATTGGTTCAGCAAGAAAAGAGAAATAATGGAACGTGATGAAACACTGGCATCATCTTTTTTCTCATGTAAGGTCAAGAGCTTCCATCGAATAACTTTTGACCAACGTGAGATATTTCAAGCCATGGTTGGCAAGAACGTTGTGGGGCACGGTGGATCTGGGACAGTGTATAAGATTGAATTGAGCACTGGGGATGTAATTGCAGTAAAAAGGCTATGGAGTCGAAAGACAAAAGATTTGCCATTTGATGATCGGCTGCTTTTAGACAAGGAGTTAAAAACTGAGGTGGAGACTCTTGGAAATATAAGGCATAAAAACATAGTCAAACTGTACAGTTACATCTCAAGCCTGAATTGCAGCCTATTGGTTTACGAGTACATGACAAACGGTAACCTTTGGGATGCCCTCCATAAAGGGTGGATCCATCTGGATTGGTGTACTCGGCATCAAATTGCACTCGGCCTATCTGAGGGTTTAGCTTACCTCCACCACGATCTGATTCCCCCTATCATTCACAGAGACATTAAAACCACAAATATCCTACTCGACACAAATTACCAGCCAAAGCTTGCAGATTTTGGCATAGCCAAAGTTTTGCAATCTAGGGGAGGTAAGGACTCAACCACTACAATTGTTGCAGGAACTTATGGCTATTTCGCACCTGAGTATGCGTATTCCTCCAAAGCAACAACTAAGTGTGACGTCTACAGTTTTGGAGTAGTATTGATGGAATTAGTCACCGGCAAGAAGCCAGTAGATGCAGAGTTCGGGGACAGCAAAAATATCATTTGCTGGGTTGCTAGCAAAGTGAATACCCAAGAAGGAACTATCAAAGTTTTAGACAAGCGGTTACCAGGGTCATTCAAGGAGATGATCCAGGTTCTTCGAATCGCTATCCTCTGCACTCACAAAAATCCAGTGCTTCGCCCAACCATGAGAGAGTGCATAAAACCCCTCAATGATGAGAAGGCATTACCTTTTGGATCATAG 1503 41.65 MQNNRISGVLPPGISRATNLVKIDLSNNLLSGPIPSEIGNLEKINLLLLQGNKLNSSIPKSLSLLKSLNVLDLSNNLLTGNIPESLSELLPNSVNFSNNKLYGPIPLSLIKGGLVESFSGNPGLCVSVYQESSGQNFPMCTQTYNRKRLSFIWAIVVSIVVTFIGAALFLKHWFSKKREIMERDETLASSFFSCKVKSFHRITFDQREIFQAMVGKNVVGHGGSGTVYKIELSTGDVIAVKRLWSRKTKDLPFDDRLLLDKELKTEVETLGNIRHKNIVKLYSYISSLNCSLLVYEYMTNGNLWDALHKGWIHLDWCTRHQIALGLSEGLAYLHHDLIPPIIHRDIKTTNILLDTNYQPKLADFGIAKVLQSRGGKDSTTTIVAGTYGYFAPEYAYSSKATTKCDVYSFGVVLMELVTGKKPVDAEFGDSKNIICWVASKVNTQEGTIKVLDKRLPGSFKEMIQVLRIAILCTHKNPVLRPTMRECIKPLNDEKALPFGS 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 35721352 35723691 - Bda000154.1 Bda13g01341 19472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01341 500 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 492 - -
Bda13g01341 500 ProSitePatterns Protein kinases ATP-binding region signature. 219 241 IPR017441 GO:0005524
Bda13g01341 500 SMART serkin_6 213 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01341 500 PRINTS Leucine-rich repeat signature 65 78 - -
Bda13g01341 500 PRINTS Leucine-rich repeat signature 20 33 - -
Bda13g01341 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 341 353 IPR008271 GO:0004672|GO:0006468
Bda13g01341 500 ProSiteProfiles Protein kinase domain profile. 213 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01341 500 Gene3D Phosphorylase Kinase; domain 1 187 297 - -
Bda13g01341 500 SUPERFAMILY Protein kinase-like (PK-like) 216 488 IPR011009 -
Bda13g01341 500 Pfam Protein kinase domain 217 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01341 500 Gene3D Ribonuclease Inhibitor 1 134 IPR032675 -
Bda13g01341 500 Gene3D Transferase(Phosphotransferase) domain 1 298 496 - -
Bda13g01341 500 SUPERFAMILY L domain-like 3 110 - -
Bda13g01341 500 ProSiteProfiles Leucine-rich repeat profile. 67 90 IPR001611 GO:0005515
Bda13g01341 500 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 1 492 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00445 Bda13g01341 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01341 Bda-Chr13:35721352 Bda13g01453 Bda-Chr13:37251958 2.44E-06 dispersed
Bda10g00028 Bda-Chr10:508517 Bda13g01341 Bda-Chr13:35721352 4.19E-06 wgd
Bda13g01341 Bda-Chr13:35721352 Bda03g00445 Bda-Chr3:3813730 1.90E-06 wgd
Bda13g01341 Bda-Chr13:35721352 Bda04g00148 Bda-Chr4:4062338 7.37E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70014 PF00069 Pkinase 3.20E-47 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01341 - - csv:101222864 745.732