Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01349 CGGGAAGCTGAAGGAAAATTGAAGGGAGAGATGGTGGTGAGGAAAGTGGGGAAGTATGAGGTGGGGAGGACGATCGGGGAGGGAACATTTGCTAAGGTAAAGTTTGCTCAGAACACGGAGACCGGCGAGAGTGTTGCTATGAAAGTTCTAGACCGGAGCACCATCATCAAGCACAAGATGGCCGACCAGATAAAAAAGGAGATATCCATTATGAAGCTTGTCAGACATCCTTATGTTGTTCTTGCTAGCCGTACGAAGATATATATTATCTTAGAGTTCATTACAGGCGGTGAACTATTTGATAAAATAATTCATAAAGGGCGTCTTAGTGAAGCTGAGTCGAGGAGATACTTCCAACAGCTTGTTGACGGTGTCGATTACTGCCACAGCAGGGGAGTATACCACAGAGATTTGAAGCCTGAAAATCTTCTTCTTGATTCCCAAGGTAATTTGAAGATTTCAGACTTTGGTCTTAGTGCATTGCCTGAAGAAGGAGTTAGCTTACTTCGAACAACTTGTGGAACTCCAAATTATGTTGCTCCAGAGGTGCTTGGTCACAAAGGTTATGATGGTAGCAAGGCAGACATTTGGTCCTGTGGGGTAATTCTTTATGTACTGATGGCTGGATATCTTCCATTTGATGAGCTTGATCTCACCACGCTATATATTATTAATGCCGATTTTTCATGTCCATCCTGGTTTCCCGTCGGAGCAAAATCTTTAATCCATAGAATTTTGAATCCAAATCCTGAAACTCGAATCTCAATTGATCAGATCAGGGAGGATGAATGGTATAAGAAGGGTTATGATCCTGTCAGACTTTTTGAATACGAAGATGTAAATCTGGACGATGTAAATGCCGTTTTTGATGACCCCGAGGAACAAAGGCCCGACGGGGAAGAACTTGGGAGTGAGGACCGGGGCCCTCTTAATCTTAATGCATTTGACTTAATAATTTTATCTCAAGGGTTAAATCTTGCAACTCTGTTTGACCGTGGCCAGGATTCCATAAAGTATCAGACTCGCTTTGTCTCTCAGAAGCCGGCAAATGTGATATTATCGACCATGGAAGTCGTTGCTCAATCGATGGGTTTTAAGACGCATATTCGAAATTACAAGGTAATTCCTTTTCAGATATATCAAATGTATTCTCTTCGTGTTGTGTGTATCAACTGCATTTTGGATGGGAATGTGATTTTTTCTATTTTCAATTGA 1215 41.81 REAEGKLKGEMVVRKVGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMADQIKKEISIMKLVRHPYVVLASRTKIYIILEFITGGELFDKIIHKGRLSEAESRRYFQQLVDGVDYCHSRGVYHRDLKPENLLLDSQGNLKISDFGLSALPEEGVSLLRTTCGTPNYVAPEVLGHKGYDGSKADIWSCGVILYVLMAGYLPFDELDLTTLYIINADFSCPSWFPVGAKSLIHRILNPNPETRISIDQIREDEWYKKGYDPVRLFEYEDVNLDDVNAVFDDPEEQRPDGEELGSEDRGPLNLNAFDLIILSQGLNLATLFDRGQDSIKYQTRFVSQKPANVILSTMEVVAQSMGFKTHIRNYKVIPFQIYQMYSLRVVCINCILDGNVIFSIFN 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 35841614 35844613 + Bda000164.1 Bda13g01349 19480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01349 404 PANTHER - 12 374 - -
Bda13g01349 404 SUPERFAMILY Protein kinase-like (PK-like) 16 281 IPR011009 -
Bda13g01349 404 Gene3D Transferase(Phosphotransferase) domain 1 11 299 - -
Bda13g01349 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Bda13g01349 404 Pfam NAF domain 309 367 IPR004041 GO:0007165
Bda13g01349 404 Gene3D Kinase associated domain 1, KA1 306 392 - -
Bda13g01349 404 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 12 374 - -
Bda13g01349 404 SMART serkin_6 19 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01349 404 ProSitePatterns Protein kinases ATP-binding region signature. 25 57 IPR017441 GO:0005524
Bda13g01349 404 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Bda13g01349 404 Pfam Protein kinase domain 19 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01349 404 ProSiteProfiles Protein kinase domain profile. 19 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01349 404 CDD CIPK_C 313 371 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01349 Bda-Chr13:35841614 Bda09g01554 Bda-Chr9:47130198 1.35E-122 dispersed
Bda13g01349 Bda-Chr13:35841614 Bda02g00217 Bda-Chr2:37984911 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70015 PF00069 Pkinase 5.00E-66 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01349 - - zju:107421347 654.44