Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01369 ATGGCGCCCAGATATGATTCTGGATTTTCAAGCCTTTTATGTGCAGAGGACTACACCACTTTCGATAATAATGAGTATGGAGGTGCGGCGGAGGAGGCGGAGGAGGCTACGTGGCCTCGTCCGAATCACCGCACTCATTATCAGAATCAGAGCTCTAATGGCGAAATTTTGCCATTGCCGAGCGACGAGTTCTTGAGTCTGATGATTGAGCAGGAATGCCATCATCTACCTCGGAGTGATTATTTGAAGAGGTTAAGAGATTCAGATCAAGACCTCATGGCTAGACAAGAAGCCGTGGATTGGATAATAAAGGTTGGAGCTCATTTTAGTTTTGGACCTCTCTCTACGTACTTGGCCATAAATTACTTGGATCGATTTCTTTCGACTTACGAATTACCTAAAGGAAAAGCTTGGACCATGCAATTGCTATCTGTGGCCTGTTTATCTCTTGCAGCAAAATTGGAGGAGACTCAAGTTCCACTCTCTCTAGATTTGCAGGTGGGCGAATCCAAATTCATCTTTGAATCACGAACCATTCAAAGAATGGAGCTTCTGGTTTTGAGCACTCTAAAGTGGAGAATGCAGTCTATTACTCCATTTTCCTTCATAGACTATTATCTTCACACAATTCTTGACAATCGACTCTTACTTGAATCGTCAATCGTCCGAACGATTCAACTTTTTTCGATCACTATGCGAGAAATTGAGTTCTTGGAATTCAGACCATCAGAGATTGCAACTGCAGTGGCTATATGTGTTGCTGGGGAGACCCAAATGGTGGATGTTGAAAAAGCAATTTGTCTGCTTACTCGGAATACCCAGGAGGAAAGAGTTGTAAAGTGCATTAAATTGATGGAGAGGGATTGTAATGGTTCAGTTCTTGATCCTCAAAGTCCAAATGGGGTGCTGGAAATCGCCTGTTTAAGCTACAGAAGTGATGAAACAGGAGACGGGTTGTGTGAGAGCTCTTCCCACGGTAGCCCGGTTGCCGCCATGGCCAAGAGGCGGAGGCTGAACAGAGCCTGTGATGTGGAGCTGTAA 1041 44.67 MAPRYDSGFSSLLCAEDYTTFDNNEYGGAAEEAEEATWPRPNHRTHYQNQSSNGEILPLPSDEFLSLMIEQECHHLPRSDYLKRLRDSDQDLMARQEAVDWIIKVGAHFSFGPLSTYLAINYLDRFLSTYELPKGKAWTMQLLSVACLSLAAKLEETQVPLSLDLQVGESKFIFESRTIQRMELLVLSTLKWRMQSITPFSFIDYYLHTILDNRLLLESSIVRTIQLFSITMREIEFLEFRPSEIATAVAICVAGETQMVDVEKAICLLTRNTQEERVVKCIKLMERDCNGSVLDPQSPNGVLEIACLSYRSDETGDGLCESSSHGSPVAAMAKRRRLNRACDVEL 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 36271879 36273690 + Bda000188.1 Bda13g01369 19500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01369 346 SMART Cyclin_C_2 197 328 IPR004367 -
Bda13g01369 346 Gene3D - 78 195 - -
Bda13g01369 346 Gene3D - 67 282 - -
Bda13g01369 346 SMART cyclin_7 100 188 IPR013763 -
Bda13g01369 346 SUPERFAMILY Cyclin-like 179 287 IPR036915 -
Bda13g01369 346 Pfam Cyclin, C-terminal domain 197 291 IPR004367 -
Bda13g01369 346 Pfam Cyclin, N-terminal domain 65 194 IPR006671 -
Bda13g01369 346 CDD CYCLIN 95 187 IPR013763 -
Bda13g01369 346 SUPERFAMILY Cyclin-like 60 194 IPR036915 -
Bda13g01369 346 MobiDBLite consensus disorder prediction 33 54 - -
Bda13g01369 346 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 328 - -
Bda13g01369 346 PANTHER CYCLINS 1 328 IPR039361 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g00791 Bda13g01369 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01437 Bda-Chr7:26542392 Bda13g01369 Bda-Chr13:36271879 1.17E-73 dispersed
Bda11g01253 Bda-Chr11:13122638 Bda13g01369 Bda-Chr13:36271879 1.04E-53 dispersed
Bda13g01369 Bda-Chr13:36271879 Bda14g01328 Bda-Chr14:14972172 9.24E-75 dispersed
Bda14g01452 Bda-Chr14:19597163 Bda13g01369 Bda-Chr13:36271879 1.84E-45 dispersed
Bda08g00683 Bda-Chr8:7267972 Bda13g01369 Bda-Chr13:36271879 6.31E-62 transposed
Bda11g00791 Bda-Chr11:7884683 Bda13g01369 Bda-Chr13:36271879 2.07E-72 wgd
Bda13g01369 Bda-Chr13:36271879 Bda04g00112 Bda-Chr4:2528103 7.99E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01369 K18810 - zju:107406252 407.912