Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01389 ATGGCGGCTGCACCCTCACCTCGCGAGGAGTTCGTGTACATGGCGAAGCTTGCTGAGCAGGCGGAGCGCTACGAAGAGATGGTCGAGTTCATGGAGAAAGTTTCGAGCTCTGCTGACAAAGAAGAGCTCACGGTCGAAGAGAGAAACCTTCTCTCCGTTGCCTACAAGAATGTGATTGGAGCACGCAGGGCTTCCTGGCGGATCATTTCCTCCATCGAACAGAAAGAGGAAAGTCGAGGCAACGACAATCATGTCACTGTGATCCGTGACTACAGATCCAAGATCGAGAACGAGCTCTCCAAAATTTGCGACGGTATTCTCAAGCTCCTCGACTCCCGTCTCATTCCATCGGCTTCTGCTGGAGATTCCAAGGTCTTTTACCTTAAAATGAAAGGTGACTACCATAGGTACTTGGCTGAGTTCAAAACCGGAGCCGAGCGTAAGGAAGCAGCTGAGAGTACGCTCACTGCTTACAAATCAGCTCAGGTTTATCCCCTGATTCCGCTTCATTATTATAGGATGGAAATCTCTGCTACAGTATTGCTGCTTATTTTATTATTTTTGTTTCAACAGGATATTGCAAATGCGGAACTGGCTCCTACCCATCCCATCCGACTTGGACTGGCTCTTAACTTCTCTGTGTTTTACTATGAGATCTTGAACTCCCCTGATCGTGCTTGCAGTCTAGCTAAACAGGTTGTTTCAAATTTACTGGTTTCGTGTATTGAACAGGCTTTTGATGAGGCAATTGCTGAGCTTGACACTCTTGGCGAGGAATCGTACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTCACGTTGTGGACATCTGATATGCAGGATGATGGGGCAGACGAGATAAAAGAAGCTCCCAAGCAAGATGGTGAGCAGCAGTGA 906 47.46 MAAAPSPREEFVYMAKLAEQAERYEEMVEFMEKVSSSADKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDNHVTVIRDYRSKIENELSKICDGILKLLDSRLIPSASAGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQVYPLIPLHYYRMEISATVLLLILLFLFQQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQVVSNLLVSCIEQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPKQDGEQQ 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 36548803 36550449 - Bda000213.2 Bda13g01389 19520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01389 301 Pfam 14-3-3 protein 14 163 IPR023410 -
Bda13g01389 301 Pfam 14-3-3 protein 192 279 IPR023410 -
Bda13g01389 301 SUPERFAMILY 14-3-3 protein 192 288 IPR036815 -
Bda13g01389 301 Gene3D - 2 292 IPR036815 -
Bda13g01389 301 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Bda13g01389 301 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 190 293 - -
Bda13g01389 301 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 5 163 - -
Bda13g01389 301 SMART 1433_4 8 292 IPR023410 -
Bda13g01389 301 PIRSF 2014/3/3 2 181 IPR000308 -
Bda13g01389 301 PIRSF 2014/3/3 189 291 IPR000308 -
Bda13g01389 301 PANTHER 14-3-3 PROTEIN 190 293 IPR000308 -
Bda13g01389 301 PANTHER 14-3-3 PROTEIN 5 163 IPR000308 -
Bda13g01389 301 Coils Coil 14 34 - -
Bda13g01389 301 ProSitePatterns 14-3-3 proteins signature 2. 261 280 IPR023409 -
Bda13g01389 301 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Bda13g01389 301 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Bda13g01389 301 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Bda13g01389 301 SUPERFAMILY 14-3-3 protein 7 176 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01389 Bda-Chr13:36548803 Bda13g01756 Bda-Chr13:40903858 1.41E-148 dispersed
Bda13g01389 Bda-Chr13:36548803 Bda13g01393 Bda-Chr13:36620851 0 proximal
Bda01g00893 Bda-Chr1:41914948 Bda13g01389 Bda-Chr13:36548803 1.58E-179 wgd
Bda11g00775 Bda-Chr11:7779739 Bda13g01389 Bda-Chr13:36548803 2.88E-96 wgd
Bda13g01389 Bda-Chr13:36548803 Bda03g00486 Bda-Chr3:4165513 1.91E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01389 K06630 - zju:107420766 455.292