Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01393 ATGGCGGCTGCACCCTCACCTCGCGAGGAGTTCGTGTACATGGCGAAGCTTGCTGAGCAGGCGGAGCGCTACGAAGAGATGGTCGAGTTCATGGAGAAAGTTTCGAGCTCTGCTGACAAAGAAGAGCTCACGGTCGAAGAGAGAAACCTTCTCTCCGTTGCCTACAAGAATGTGATTGGAGCACGCAGGGCTTCCTGGCGGATCATTTCCTCCATCGAACAGAAAGAGGAAAGTCGAGGCAACGACAATCATGTCGCTGTGATACGTGACTACAGATCCAAGATCGAGAACGAGCTCTCCAAAATTTGCGACGGTATTCTCAAGCTCCTCGACTCCCGTCTCATTCCATCGGCTTCTGCTGGAGATTCCAAGGTCTTTTACCTTAAAATGAAAGGTGACTACCATAGGTACTTGGCTGAGTTCAAAACCGGAGCCGAGCGTAAGGAAGCAGCTGAGAGTACGCTCACTGCTTACAAATCAGCTCAGGATATTGCAAATGCGGAACTGGCTCCTACCCATCCCATCCGACTTGGACTGGCTCTTAACTTCTCTGTGTTTTACTATGAGATCTTGAACTCCCCTGATCGTGCTTGCAGTCTAGCTAAACAGGCTTTTGATGAGGCAATTGCTGAGCTTGACACTCTTGGCGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTCACGTTGTGGACATCTGATATGCAGGATGATGGGGCAGACGAGATAAAAGAAGCTCCCAAGCAAGATGGTGAGCAGCAGTGA 783 49.55 MAAAPSPREEFVYMAKLAEQAERYEEMVEFMEKVSSSADKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDNHVAVIRDYRSKIENELSKICDGILKLLDSRLIPSASAGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPKQDGEQQ 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 36620851 36622501 - Bda000218.1 Bda13g01393 19524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01393 260 Pfam 14-3-3 protein 14 238 IPR023410 -
Bda13g01393 260 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Bda13g01393 260 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Bda13g01393 260 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 5 252 - -
Bda13g01393 260 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Bda13g01393 260 PANTHER 14-3-3 PROTEIN 5 252 IPR000308 -
Bda13g01393 260 Coils Coil 14 34 - -
Bda13g01393 260 PIRSF 2014/3/3 2 250 IPR000308 -
Bda13g01393 260 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Bda13g01393 260 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Bda13g01393 260 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Bda13g01393 260 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Bda13g01393 260 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Bda13g01393 260 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Bda13g01393 260 SMART 1433_4 8 251 IPR023410 -
Bda13g01393 260 Gene3D - 2 251 IPR036815 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00486 Bda13g01393 CCT
Bda01g00893 Bda13g01393 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00893 Bda-Chr1:41914948 Bda13g01393 Bda-Chr13:36620851 0 dispersed
Bda01g01183 Bda-Chr1:47114550 Bda13g01393 Bda-Chr13:36620851 1.63E-162 dispersed
Bda03g00486 Bda-Chr3:4165513 Bda13g01393 Bda-Chr13:36620851 6.37E-153 dispersed
Bda10g00066 Bda-Chr10:1298363 Bda13g01393 Bda-Chr13:36620851 7.26E-138 dispersed
Bda11g00775 Bda-Chr11:7779739 Bda13g01393 Bda-Chr13:36620851 1.28E-105 dispersed
Bda13g01393 Bda-Chr13:36620851 Bda13g01756 Bda-Chr13:40903858 1.42E-152 dispersed
Bda13g01729 Bda-Chr13:40605875 Bda13g01393 Bda-Chr13:36620851 1.27E-119 dispersed
Bda13g01389 Bda-Chr13:36548803 Bda13g01393 Bda-Chr13:36620851 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01393 K06630 - twl:120010991 479.559