Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01438 TTATCTAACATGGGGAATGATTCAGTTGTCCGGGCCGATATTCAGGCTTCAAGCTCTCTGGGCAAGATTATTGTCGTCTCTGCCATTGCAGCCGGGGTTCAGTTCGGATGGGCTCTCCAGCTCTCGCTGTTAACTCCCTACGTTCAGCAATTAGGAGTTCCCCACACTTGGGCGGCATTCATCTGGCTTTGTGGTCCCATTTCTGGTTTATTGGTTCAGCCCATTGTTGGCTACTACAGTGATCGGTGCACTTTACGGATAGGTCGTCGCCGTCCGTTCATCATTGGCGGCGCAGCCTTCGTCGCTCTTGCTGTTTTCCTTATTGGCTTCGCTGCTGACATCGGTCATGCTGCTGGGGATGATCTATCGAAGTCGACAAAGCCACGTGCCGTCGCCATTTTCGTTGTCGGTTTCTGGGTCCTCGACGTTGCTAACAATATGTTGCAAGGACCTTGCAGAGCTTTTCTGGCGGATCTTTCCGGTAGCGACCACAAGAAAATGGCCCTCTCTAATGGTTTCTTCGCTTTCTTCATGGCTGTCGGAAACATTTTGGGTTACGCAGCCGGTTCGTACGACAACCTCCATGAGTTCCTCCCCTTCACGGAGACAAAAGCATGTGATGTTTACTGCGCAAATCTGAAATCGTGCTTCATCATCGACATCATCCTCCTCATCGCCGTAACAGTGTTTGCCGTTTCGACAGTGAGCGAGACTCCATTCGAGAGAAAGGCGGAAGACGAGGAATCAAAGTTCTTCTTCACCCAATTGTCGACGGCGTTCAAGCAGCTTTCTAGACCCATGTGGCTTCTCTTTCTTGTGACTGCTCTGAATTGGATCGCTTGGTTCCCCTTCCTGCTGTTTGACACAGACTGGATGGGTCTAGAAGTGTACGGAGGAAAGGCAAAGGGGACGACGCAAGAAGTGAAGATTTATGATCTTGGTGTGAGAGCTGGGGCTCTAGGTTTGATGATCAACTCCATTGTTCTGGCATTCGCATCACTCGCCGTCGAGCCCATTGGTCGGACTTTGAAGGGCGTGAAGAATTGGTGGGCGATTGTTAACATTATCTTGGCCATCTCCATGGGTATGACTGTTGTTGTGACTAAGGTCGCTGAAAATTGGAGGTCTACCAATGGCCTCCACCCTCCTCCCTCTAACATTAAAGCTGGAGCATTGGCCATCTTTGCCATTCTGGGCATTCCTCTTTCGGTGAACTACAGTGTTCCATGGGCTTTGGCATCCATCTACTCTGTCACTTGCGGCGCTGGCCAAGTTTTCTGCCATTTTTCTGGTTGCACAGGACTTTCTCTAGGACTGTTGAACTTGGCCATCGTCATTCCACAGATGATCGTGTCGGTGGGGAGCGGTCCTCTGGACGCAGCGTTCGGCGGGGGAAACTCAGCAGCGTTCGTGATGGGCGGCATAGCAGCAGCCGTCAGTGCGGTTCTGGCTATGAGGATTCTTCCGAAAACACCAAGGCAGTCAAGCTCCTTCTTGAGCATGGGAGGACATTAA 1515 51.22 LSNMGNDSVVRADIQASSSLGKIIVVSAIAAGVQFGWALQLSLLTPYVQQLGVPHTWAAFIWLCGPISGLLVQPIVGYYSDRCTLRIGRRRPFIIGGAAFVALAVFLIGFAADIGHAAGDDLSKSTKPRAVAIFVVGFWVLDVANNMLQGPCRAFLADLSGSDHKKMALSNGFFAFFMAVGNILGYAAGSYDNLHEFLPFTETKACDVYCANLKSCFIIDIILLIAVTVFAVSTVSETPFERKAEDEESKFFFTQLSTAFKQLSRPMWLLFLVTALNWIAWFPFLLFDTDWMGLEVYGGKAKGTTQEVKIYDLGVRAGALGLMINSIVLAFASLAVEPIGRTLKGVKNWWAIVNIILAISMGMTVVVTKVAENWRSTNGLHPPPSNIKAGALAIFAILGIPLSVNYSVPWALASIYSVTCGAGQVFCHFSGCTGLSLGLLNLAIVIPQMIVSVGSGPLDAAFGGGNSAAFVMGGIAAAVSAVLAMRILPKTPRQSSSFLSMGGH 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 37127035 37128801 + Bda000270.1 Bda13g01438 19569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01438 504 CDD MFS_SLC45_SUC 23 484 - -
Bda13g01438 504 TIGRFAM GPH_sucrose: sucrose/H+ symporter 19 491 IPR005989 GO:0005887|GO:0008515|GO:0015770
Bda13g01438 504 Gene3D MFS general substrate transporter like domains 20 490 IPR036259 -
Bda13g01438 504 Pfam MFS/sugar transport protein 36 280 - -
Bda13g01438 504 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 15 495 - -
Bda13g01438 504 PANTHER SUGAR TRANSPORTER 15 495 - -
Bda13g01438 504 SUPERFAMILY MFS general substrate transporter 24 494 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02166 Bda-Chr1:57566065 Bda13g01438 Bda-Chr13:37127035 2.78E-137 dispersed
Bda07g00816 Bda-Chr7:9639230 Bda13g01438 Bda-Chr13:37127035 0 dispersed
Bda13g01438 Bda-Chr13:37127035 Bda13g01439 Bda-Chr13:37149760 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01438 K15378 - csv:116401998 694.501