Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01455 ATGTCTGTGATGGAATTTGACCAGCGTTCATCTGTCACCGCCATCGTTGTGGCAGTGGTTGCCGTAGCCATAGCAGCACCAACGGCGGCGCAGAGTCAAGCGAAGGACGGGTGCGAGAGCAGCTGCGGCAACGTCTCTATCCCCTTCCCATTCGGCACAAGCGAGAACTGCTATTTGGACGAACAATTCCTCGTCGCCTGCAACAGAACTCTCGACCCTCCAAAGGCAACTCTCCAAGAATCCACCATTCAAGTCCTCAACATCTCTCTGGTTGGCGAGATGATCATCTTAAACCAGCGATCTGTGGAGTGCTACGACTCAGTAGGGACGAAAACAGGAATAGACACTGTCTTAGCATGGATGCGCTTCGGGAGGTTTAGAATCTCATCAACCAAGAACAAGTTCACTGTCGTTGGGTGTGACACGATAGGATTGATTGCTGGCGTTCTGGGCAAGGTTTACGTAACTGGGTGCTTCGCTTTTTGCAACAACATCACTGACGTGACTAATGGGTCTTGCGATGGAGTTGGCTGTTGTCAATCTTCACTCCCTTTTGGGGCACACGATTACAACGTAACTCTTGGAAGTGCTCTTAATCATACTTACGTGTATCAGTTCAATCCCTGTGACTTTGCTTTCATTGTTCAAGATGATTGGTATCAATTCTCCTCTGCTGATCTTTTTGATCTGAGACAAACTCAAGAGTTCCCTATGGTTCTTGACTGGTCTGTTGGAAATCAAACCTGTGAAACAGCTCGAGAAAATGGAGTTTATGCTTGCATGGGTAATTCAAACTGCACAGACGCAGATAATGGTTTTGGTTATAAATGTTTGTGTTTAAATGGTTATTCTGGCAATCCTTACCTGCGCGACTGCATAGATATTGATGAATGCAAAAGTTTAACTTTAAACGACTGCTCCGAAAAGTCAACATGTATAAATACAATTGGTCTGTATAAGTGTTCGTGTCCTAAAGGCTACAGTGGCGACGGCCATAAATCTGGATCAGGCTGTACGGCCAATCAGAAAAACAGTACCATGATGATTGTGGGATTATCAATAAGCACAAGCCTTTTGGCTCTTCTCTCTGTTGGTTTGTGGATATTGTGGGGAGTAAAGCGAAGAAAGTTGCAGCAACTGAGACAGAAATTTTTCCATCAAAATGGCGGGACGATGCTGCTTCAACAGCTCTCCGGCCATGACGGATCAACCAATGCTACAAAAATATTTACAGAGGAAGATCTGAAGAAGGCGACTAAGGACTTTCATGAAAGTAGGATTATTGGTCAAGGTGGACAAGGAACAGTTTACAAAGGAATTCTAGCAGACGACCGGGTCGTCGCCATTAAAAAAGCTCGAATCGGAGACGAAAGCCAAGTGAAGGATTTCGTCAACGAAGTTGCGTTGCTGTTTAACGTCAGCCATAAGAACGTGGTGAAGCTTTTGGGTTGTTGTTTTGAGACTCAAGTTCCTACTCTGATCTACGAGTATGTCAGCCATGGCTCTCTCCTCGACCAGCTGAAAATGGCTGAAACTACACCGTTTCCATGGGAGCTTCGTTTGAAGATAGCAACAGAGACAGCAGAAGCACTCTGGTATTTACACTCTCAACTCTCCACACCGATCATTCACAGAGACATTAAATCAGCCAACATACTTCTAGACAAAAATTACACAGCAAAAGTGTCGGATTTTGGAGCTTCAAGATTAGTCCAACAAGACAACGAGAGTCAAAAGGAAAACACCGCAGTGCAAGGAACAATCGGATATCTAGATCCGGAGTACATAATAACACAGCAGCTCAACGAAAAGAGCGACGTCTACAGCTTCGGCGTTGTGCTTGTGGAGTTACTTGCAGGAATATCAGTAATTGATTTTAGGCGTAATAATCCATCGAAAAGCTTGGTAATTCACGTCCTTTCCTCCTTAAAATCCGATCGTCTATCAGAGGTGTTAGACCCACAAATAGCGAGTGAGAAGAACATGAAGGAACTTAAGGCAGTGGCTGCGCTGGCAAGAAGCTGTGTGAGAGACAGTGGGGAGGAGAGGCCATCAATGAAACAAGTCTTTTCTGTGCTAGAAGGATTAATACCGGTGGGAAAAACCCGAATCGTCGAAGATGGCGGCGTTGACGTTCACAAAGAGGAGAAGTACTTGCTCGGTGAGTTTTCCGACGCCATTAACAACGGCGATACAAGCGGAACGGCCAGGTATGACAGTATAAAGGCCCAGTTTACGTTTGATACTACTAAGGCCCGTTGA 2262 45.4 MSVMEFDQRSSVTAIVVAVVAVAIAAPTAAQSQAKDGCESSCGNVSIPFPFGTSENCYLDEQFLVACNRTLDPPKATLQESTIQVLNISLVGEMIILNQRSVECYDSVGTKTGIDTVLAWMRFGRFRISSTKNKFTVVGCDTIGLIAGVLGKVYVTGCFAFCNNITDVTNGSCDGVGCCQSSLPFGAHDYNVTLGSALNHTYVYQFNPCDFAFIVQDDWYQFSSADLFDLRQTQEFPMVLDWSVGNQTCETARENGVYACMGNSNCTDADNGFGYKCLCLNGYSGNPYLRDCIDIDECKSLTLNDCSEKSTCINTIGLYKCSCPKGYSGDGHKSGSGCTANQKNSTMMIVGLSISTSLLALLSVGLWILWGVKRRKLQQLRQKFFHQNGGTMLLQQLSGHDGSTNATKIFTEEDLKKATKDFHESRIIGQGGQGTVYKGILADDRVVAIKKARIGDESQVKDFVNEVALLFNVSHKNVVKLLGCCFETQVPTLIYEYVSHGSLLDQLKMAETTPFPWELRLKIATETAEALWYLHSQLSTPIIHRDIKSANILLDKNYTAKVSDFGASRLVQQDNESQKENTAVQGTIGYLDPEYIITQQLNEKSDVYSFGVVLVELLAGISVIDFRRNNPSKSLVIHVLSSLKSDRLSEVLDPQIASEKNMKELKAVAALARSCVRDSGEERPSMKQVFSVLEGLIPVGKTRIVEDGGVDVHKEEKYLLGEFSDAINNGDTSGTARYDSIKAQFTFDTTKAR 753
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 37372959 37375918 - Bda000291.1 Bda13g01455 19586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01455 753 ProSitePatterns EGF-like domain signature 2. 277 292 IPR000742 -
Bda13g01455 753 Gene3D Transferase(Phosphotransferase) domain 1 498 705 - -
Bda13g01455 753 ProSitePatterns Calcium-binding EGF-like domain signature. 294 321 IPR018097 GO:0005509
Bda13g01455 753 SUPERFAMILY EGF/Laminin 293 332 - -
Bda13g01455 753 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 733 IPR045274 GO:0007166
Bda13g01455 753 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 312 323 IPR000152 -
Bda13g01455 753 SMART serkin_6 422 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01455 753 Pfam Calcium-binding EGF domain 294 331 IPR001881 GO:0005509
Bda13g01455 753 SUPERFAMILY Growth factor receptor domain 244 328 IPR009030 -
Bda13g01455 753 SUPERFAMILY Protein kinase-like (PK-like) 404 693 IPR011009 -
Bda13g01455 753 SMART egf_5 297 339 IPR000742 -
Bda13g01455 753 SMART egf_5 248 293 IPR000742 -
Bda13g01455 753 CDD STKc_IRAK 428 696 - -
Bda13g01455 753 CDD EGF_CA 294 330 - -
Bda13g01455 753 ProSiteProfiles Protein kinase domain profile. 422 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01455 753 Pfam Wall-associated receptor kinase galacturonan-binding 38 95 IPR025287 GO:0030247
Bda13g01455 753 ProSiteProfiles EGF-like domain profile. 294 330 IPR000742 -
Bda13g01455 753 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 20 733 - -
Bda13g01455 753 Pfam Protein kinase domain 422 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01455 753 Gene3D Laminin 298 334 - -
Bda13g01455 753 Gene3D Phosphorylase Kinase; domain 1 395 497 - -
Bda13g01455 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Bda13g01455 753 SMART egfca_6 294 339 IPR001881 GO:0005509
Bda13g01455 753 Gene3D Laminin 246 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00582 Bda-Chr9:8229430 Bda13g01455 Bda-Chr13:37372959 8.08E-15 dispersed
Bda11g00947 Bda-Chr11:9235632 Bda13g01455 Bda-Chr13:37372959 0 dispersed
Bda13g01455 Bda-Chr13:37372959 Bda15g00339 Bda-Chr15:6253955 2.69E-85 dispersed
Bda13g01454 Bda-Chr13:37342392 Bda13g01455 Bda-Chr13:37372959 2.54E-110 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70019 PF00069 Pkinase 1.60E-48 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01455 - - gab:108481348 723.005