Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01465 ATGAAATTGTTCGAACATGGCATACTCGGAGAACCAGAGACTGTCGGCTCCGGCGGCCGCAGTGTGGTGGTAGGCATGAAGCTTGACTCACATAGCAGAGAGCTTCTAACTTGGGCTTTGGTGAAAGTAGCTCAGCCTGGTGACGTTGTGATTGCTCTTCATGTTCTTGGCAACGACGAGATCATGGATCGGAATGGTAAGTCCTCGCTTCTTTCTATTGCCAAAGCGTTCGACTCTGTTCTTGCCGTCTATGAAGGTTTCTGCAATTTGAGACAGGTGGATCTCAAGCTTAAGATATGCAGAGGTCAATCAGCTCGGAAAGTTATAGTCAGGGAAGCAAATTCTTATAAGGCTACCAATGTGATAGTCGGGACTTCTCGTAATCACCACAAAATTCGGTCATCGACCTTGGTTGCCAAGTATTGTGCCAATAAACTTTCTAACGATTGTTGGGTTCTAGCTGTAAAAAATGGGAAAGTTGTTTTCGAAAGAGAAGCCTCAACGGAAAATATCTATGACTTCCAAGGAATTGAAGAGTTTCGTGGAAATGGCTTACTTGGTTCACTTCACAGGTCACTGAATAAGACTTCCAAAGTATTAAATGATGGTAATAATGCCATTGTTTGCGTAAAGGGAAACAAGGATCTACGTAATAAGAACCTGATTGTTAAACAAAACTGTATAATTTGTTCTCGGTCTTCTGCTTCGAGAAGAAAGACTATCAGCCATGGTGAAGAACATGACGACTCTTTTGCCATGGTACCAGTTCAGAAACTGAATGCAGAAGAGGCACCAACTTCTATCAGGATGTTGGTTAAAGATTTACCTGAACTGACACCTGGTTGGCCGTTGCTTCGGCATTCTGATCGATCTCTCGACAGGAATGTTTCCAGTCGGTCATTAGTTCGGAAAATGTCTGTTGTTCAGTGGGCTATGAAGTTACCTACAAGGTGTCCTTACAGTGCAATTTTGAATCAGAACCACACTCTCTCTGATTTGTTTCTGAAACTGGATGGAAGTAGAGTCATTGTGACTGTTGATCCTGAACTAGTGTCTTCTCCATCTCTTCCTGATGATAGGAAAAAATTCTTACCTAAAGAATTGGAGGATCTTCATGAAAAGCATTCATCGACTTGCCGATTGTTTAAGTACCAAGAACTTGTCCGAGCAACTTCTAATTTCTCGGCGGATAATTTGATTGGGAAAGGAGGTAGTAGCCAAGTTTATAGAGGTTGCCTTCCAAATGGGAAGGAATTAGCTGTGAAGATTTTAAAGCCATCTGAAGATGTCTTAAAGGAGTTTGTTTTAGAAATAGAAATCATGACTGCTTTGAATCACAGGAACATTGTTTCCCTTCTGGGATTCTGTTTCGAAGACAACAATCTCTTGCTGGTGTATGATTTTTTATCGAGAGGGAGTCTCGAAGAGAACCTCCATGGAAATAAGAAGGATCCAACTGCATTTGGTTGGAGCGAAAGATTTAAGGTTGCTGTCGGTGTGGCTGAGGCATTAAATTATCTTCATCAAGATAGGCTAGATCGCACTCATTCTGTGATTCACAGAGATGTAAAATCATCAAATGTATTGTTATCTGATGATTTTGAGCCACAGCTGTCAGATTTCGGGTTGGCTAAATTTGCACCAACTTCCTCTGCGCATATAATTTGCACTGATGTTGCTGGGACTTTTGGCTATTTGGCCCCAGAATACTTTATGTATGGAAAAGTAAACGACAAAGTCGATGTCTATGCTTTCGGAGTAGTACTCCTTGAGCTTCTGTCTGGGAGAAAACCTATATGCACCGAGTCTCCTAAAGGCCAAGAGAGCCTAGTTATGTGGGCAAGGCCAATTCTAAGTGGTGGAAAGGTGCATCAATTGCTAGATCCAATAGGTAACTATGATAAAGATCAGATGGAAAGGCTAATTTTAGCGGCCAGTCTTTGTATCAGGCGCGCTCCTCGAGCTCGGCCTCAAATGAACTTGGTTTTGAAGCTCCTTCAAGGCGACGAAGAAGTAACCAAGTGGGCAAGGCTTCAAGTTAACGCCGTAGAGGAATCCGAAATGCTCGACGAAGAAACATTTCCACGGTCTCATCTCCAATCGCATCTCAACCTCGCTCTGCTCGATGTGGAAGACGATTCGCTCTCCCTGAGCAGCATTGAGCAAACCATCTCACTAGAAGACTACCTGAGGGGAAGATGGAGCCGTTCATCGAGCTTCGACTAA 2226 43.08 MKLFEHGILGEPETVGSGGRSVVVGMKLDSHSRELLTWALVKVAQPGDVVIALHVLGNDEIMDRNGKSSLLSIAKAFDSVLAVYEGFCNLRQVDLKLKICRGQSARKVIVREANSYKATNVIVGTSRNHHKIRSSTLVAKYCANKLSNDCWVLAVKNGKVVFEREASTENIYDFQGIEEFRGNGLLGSLHRSLNKTSKVLNDGNNAIVCVKGNKDLRNKNLIVKQNCIICSRSSASRRKTISHGEEHDDSFAMVPVQKLNAEEAPTSIRMLVKDLPELTPGWPLLRHSDRSLDRNVSSRSLVRKMSVVQWAMKLPTRCPYSAILNQNHTLSDLFLKLDGSRVIVTVDPELVSSPSLPDDRKKFLPKELEDLHEKHSSTCRLFKYQELVRATSNFSADNLIGKGGSSQVYRGCLPNGKELAVKILKPSEDVLKEFVLEIEIMTALNHRNIVSLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPTAFGWSERFKVAVGVAEALNYLHQDRLDRTHSVIHRDVKSSNVLLSDDFEPQLSDFGLAKFAPTSSAHIICTDVAGTFGYLAPEYFMYGKVNDKVDVYAFGVVLLELLSGRKPICTESPKGQESLVMWARPILSGGKVHQLLDPIGNYDKDQMERLILAASLCIRRAPRARPQMNLVLKLLQGDEEVTKWARLQVNAVEESEMLDEETFPRSHLQSHLNLALLDVEDDSLSLSSIEQTISLEDYLRGRWSRSSSFD 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 37551055 37554557 - Bda000307.1 Bda13g01465 19596

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01465 741 CDD USP_Like 22 152 - -
Bda13g01465 741 PANTHER - 13 724 - -
Bda13g01465 741 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524
Bda13g01465 741 Gene3D HUPs 19 157 IPR014729 -
Bda13g01465 741 SUPERFAMILY Protein kinase-like (PK-like) 375 666 IPR011009 -
Bda13g01465 741 Gene3D Transferase(Phosphotransferase) domain 1 469 687 - -
Bda13g01465 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
Bda13g01465 741 Pfam Universal stress protein family 20 152 IPR006016 -
Bda13g01465 741 PANTHER OS08G0249100 PROTEIN 13 724 - -
Bda13g01465 741 ProSiteProfiles Protein kinase domain profile. 394 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01465 741 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 157 - -
Bda13g01465 741 SMART serkin_6 394 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01465 741 Pfam Protein kinase domain 396 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01465 741 Gene3D Phosphorylase Kinase; domain 1 360 468 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01465 - - - jre:109004828 960.288
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01465 Bda-Chr13:37551055 Bda12g01075 Bda-Chr12:42471649 1.06E-81 dispersed
Bda04g00386 Bda-Chr4:50888211 Bda13g01465 Bda-Chr13:37551055 2.25E-42 transposed
Bda06g00477 Bda-Chr6:6819055 Bda13g01465 Bda-Chr13:37551055 3.75E-166 transposed
Bda08g00992 Bda-Chr8:20234896 Bda13g01465 Bda-Chr13:37551055 3.79E-145 transposed
Bda10g00757 Bda-Chr10:41980393 Bda13g01465 Bda-Chr13:37551055 9.30E-89 transposed
Bda13g01796 Bda-Chr13:41656956 Bda13g01465 Bda-Chr13:37551055 5.95E-73 transposed
Bda01g01461 Bda-Chr1:50512197 Bda13g01465 Bda-Chr13:37551055 3.89E-64 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g209 . . . . . . . . Cmo04g02508 Cmo15g00658 . . . . . . . Bhi04g01860 . . . . . Lcy10g1259 Cla08g00627 . . . . . . . . Cone17ag0817 Cone20ag0422 . Csa04g01957 . Cme03g00489 Blo17g00166 Blo18g00172 . Bda13g01465 Bpe02g01658 . Bma01g00797 . . . . . . Car04g02316 Car15g00595 Cpe01g02077 . . . . . . . . . . . . . . . Lsi08g00467 . Chy03g00749 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004130 2 1 2 2 1 1 2 1 1 1 1 1 2 1 0 2 1 1 2 1 1 1 1 1 1 1 1 0 3 1 37
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70020 PF00069 Pkinase 1.10E-42 CL0016 Bda PK