Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01516 GATTTAGCTTTTTTGAAATATTCCTCTCTGGATCTTCTAGTAATTGCTGCATTTGAAATGGAGTATGCAATCTGGATTGGTGAGCAACAGAAACAGGAAAGTGGACTTAGAAATGCTCTGCAAGCTCAAGCAACAGATCTAGAGCTTCAGTCTCTTGTTGACAGTGCCTTGAATCACTACTACAATCTTTTTCGATTGAAGTCAGATGCTGCAAAAGGTGATGTTTTCTACTTGTTGTCTGGCACATGGAGAACACCAGCTGAACGGTTTTTCCTTTGGATTGGAGGATTCCGCCCTTCGCAGCTTCTAAATGTTCTGACACCCCATTTTGGGCCCTTAACAGAGGAGCAAGTGTTGCATGTCAGTAATCTGAGACAATCATGTCGAGAAGCTGAGTATGCTCTCTCACAGGGAATAGATAAACTGCATCAGGCTATACTGCAAAGCGTATCAGCAGATAACCTGAGTTCGGGATGTTTTGTTTCCCAGATGGCTGATGCAATGGAAAAGTTCGAAACACTGGAGCATTTTGTGAGCCAGCTATTAAGCAATTTTCTTAAACAGGCAGACCATCTTCGGCAACAAACCCTGCAGCGAATGTCTCACATCCTACTGACAGAGCAAGCGGCACGTGGCTTGCTTGCCTTAGGAGAGTACTTCCATCGTCTTCGTGCGCTTAGTTCACTTTGGACGACCTGTCCTCGTGAACCCTCATCAGAGCTGAAATTATATTTATCAAGGTGTGTTCAATCTAAATCTCTGGTAAGAAGATGA 774 43.8 DLAFLKYSSLDLLVIAAFEMEYAIWIGEQQKQESGLRNALQAQATDLELQSLVDSALNHYYNLFRLKSDAAKGDVFYLLSGTWRTPAERFFLWIGGFRPSQLLNVLTPHFGPLTEEQVLHVSNLRQSCREAEYALSQGIDKLHQAILQSVSADNLSSGCFVSQMADAMEKFETLEHFVSQLLSNFLKQADHLRQQTLQRMSHILLTEQAARGLLALGEYFHRLRALSSLWTTCPREPSSELKLYLSRCVQSKSLVRR 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 38213440 38215363 + Bda000364.1 Bda13g01516 19647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01516 257 PANTHER TRANSCRIPTION FACTOR TGA9 14 237 - -
Bda13g01516 257 ProSiteProfiles DOG1 domain profile. 15 233 IPR025422 GO:0006351|GO:0043565
Bda13g01516 257 Pfam Seed dormancy control 35 107 IPR025422 GO:0006351|GO:0043565
Bda13g01516 257 PANTHER TRANSCRIPTION FACTOR TGA7 14 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01516 Bda-Chr13:38213440 Bda14g01022 Bda-Chr14:8625613 4.42E-74 dispersed
Bda01g01399 Bda-Chr1:49898895 Bda13g01516 Bda-Chr13:38213440 3.28E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01516 K14431 - vvi:100255706 300.056