Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01540 ATGGTAACTTCCGGGCCACCCACTCCGATAGGTGGTGCCCAATCTGCGCCATCTTCATTTTTGAGGTCAAATTCAGGAATGTTGGGAGCTCAAGGGGTTCCTTTGCCTTCCCAGTCGTCTTTTCCTTCACTTGTATCACCTCGCACTCAGTTTGGCAATATGAATATGCTTGGTAATATACCCAATGTCTCTTCTTTCCTGAACCAGTCTTTCGCTAATGGGGGTCCAAATTCTGGGCTTTCAGTTCCCGTAAGTGGTCTGCATGGAGGTATTGACCCTGGTGCTGAGATGGATCCACTGTCCAGCGTAGGTAATGGAATGGATTTTAATAATTCTGCATCGGCATTTGTAGCATCAAACATGGGAAACCCTGGTTCTTCAGGTCAAAATCAGGGTCCCCAGTTTTCAAATCTTTCTAGTGGCCAGCTATTAACAGAGCAACAATTGGAATCACAGAATTTCCATCACGCTCAGCAGTCAATGCAGCAGTTTTCTGCTCCTTCCAGCACCTTGCAGCCACAACAGCACCAATTGCAAACAATGAGAGGAGGCTTAGGTGGAGCTGGACAAGTCAAATTGGAGCCCCAAGTGCTTACCAACGATCAGCAAGGACAACAAGCTTCCCAGCTGAGGAATCTTGGTCCAGTGAAAATAGAAAACCAACGGCTCCAACCCATGAGGGGTTTGGCACCTGTAAAAATGGAGCCCCAACACTCTGACCAGTCGATATTTCTTCATCAGCAGCAACAACAGCAACAGTTTCTTCAGATGTCTAGACAATCGACTCAGGCTGCATCCCAGATGAATCTTTTGCATAAACAACGATTCCTTCAGTTGCAGCAGCAACAACAACAGCAGCAACAACAACAACAACAACAACTTTTAAAAGCAATGCCTCAACAAAGGCTTCAATTACATCAGCAGTTACAGCAACAGAATTTGCCTCTGAGGTCAGCTGCAAAACCGACATATGAACCTGGGATGTGTGCTCGGCGTCTGACTCACTACATGTATCAGCAACAACACAGGCCCCACGACAACAATATTGAATTCTGGAGAAAGTTTGTTGCTGAGTACTTTGCTCCCAATGCCAAAAAGAAGTGGTGCGTTTCCATGTATGGAAGTGGTCGGCAGACAACTGGAGTTTTTCCTCAGGATGCATGGCACTGTGAAATATGCGACCGCAAGCCTGGCCGTGGTTTCGAAGCGGCTTTTGAAGTTCTTCCAAGGCTTTTCAAAATTAAGTATGAAAGCGGTACTTTGGAAGAACTTCTTTATGTTGATATGCCCTGTGAATATCACAATCCATCTGGTCAAATTGTCCTGGATTATGCAAAAGCAATTCAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTAGAATAGTCTTCAATACAGACCTAAAGATTTGTTCATGGGAATTCTGTGCTCGCCGTCACGAAGAGCTCATTCCTCGAAGATTATTGATACCCCAGGTTAGTCAACTCGGGGCAGCGGCCCAAAAATATCACACTACTATGCAAAGTGCATCGTCCAGTTTGTCTGCACCAGAGTTGCAAAGCAACTGTAATATGTTTGTGGCGTCAGCTCGACAACTGGCTAAAGCTTTGGAAGTCCCATTAGTTAATGATTTAGGGTATACGAAAAGATACGTGAGGTGCCTTCAGATATCAGAAGTTGTTAATAGTATGAAAGACTTGATTGATTACAGCAGAGAAACAGGAAATGGGCCTATGGATAGTCTAAGCAAATTTCCTCGGAGAAGTTCTTCAGCCGGTTTCCCGACTCAAGCTCAACGGGCAGAGGAACAACTGCAGCAGCAGCAGCAAACGTCTGTTCAGAACGCAAATAATGATCCAAGCCCTGTACAAATCTCGACTAGCAATAGCATTGCAATGGCCGGTTTAAATAATGCTATCAACATAGCCTCAACTTCCACCAGTGCAAGCACAATAGTTGGGTTACTTCACCAGAATTCCATGAGCTCAAGACTGCAAAACAGTCCCTATGGAGGAAGTTCAATTCCAATTTCATCTCCACAAACGCAACCAAATCCGTCTCAGTTCCAGCCTCCGACCCCCTCGTCGTTGAATACCCATGCACAGCCATCACAAAACGCGTTAGGATCAGCTGCAAATCACTTAAACACGTCCAATCCCTCATCAAATACTCCAATTCCCCTGCACCAACCACCATTTGCCGGTGATGCTGATCAGAATGATTCTCAGAGTTCTGTACAGAAAATTTTGCAGAAAATGTTGATGTCAAACCAAATCCCCGACACGGGTAGTGGCATGGTCAGCACTGGTTCTCTGGTAAATGAAGTGAAAAATGGAATTTTACCCACAACAAGTAATCCTGGACTTGGAAGCGTTGGACTGAATAGTTTAGGAAACGGAATGGCCATAGGTGGTGGGCACGGCCAGTCAGCTATGGTTGTCAATGGAATGAGATCCTCAGTGGGAAATAATTCCGTGATGAACGGAAGAATGGGAATGGCAACACTGGCTCGAGACCAAAGCATGAATTTTCAACATCAGGACTTGGAAAATCAGATTCTGAATGGTTTAGGAACAGCTAATGGGTTTAACAGTCTTCAATTTGATTGGAAGTCATCTCCATGA 2637 45.01 MVTSGPPTPIGGAQSAPSSFLRSNSGMLGAQGVPLPSQSSFPSLVSPRTQFGNMNMLGNIPNVSSFLNQSFANGGPNSGLSVPVSGLHGGIDPGAEMDPLSSVGNGMDFNNSASAFVASNMGNPGSSGQNQGPQFSNLSSGQLLTEQQLESQNFHHAQQSMQQFSAPSSTLQPQQHQLQTMRGGLGGAGQVKLEPQVLTNDQQGQQASQLRNLGPVKIENQRLQPMRGLAPVKMEPQHSDQSIFLHQQQQQQQFLQMSRQSTQAASQMNLLHKQRFLQLQQQQQQQQQQQQQQLLKAMPQQRLQLHQQLQQQNLPLRSAAKPTYEPGMCARRLTHYMYQQQHRPHDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDAWHCEICDRKPGRGFEAAFEVLPRLFKIKYESGTLEELLYVDMPCEYHNPSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFNTDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYHTTMQSASSSLSAPELQSNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGNGPMDSLSKFPRRSSSAGFPTQAQRAEEQLQQQQQTSVQNANNDPSPVQISTSNSIAMAGLNNAINIASTSTSASTIVGLLHQNSMSSRLQNSPYGGSSIPISSPQTQPNPSQFQPPTPSSLNTHAQPSQNALGSAANHLNTSNPSSNTPIPLHQPPFAGDADQNDSQSSVQKILQKMLMSNQIPDTGSGMVSTGSLVNEVKNGILPTTSNPGLGSVGLNSLGNGMAIGGGHGQSAMVVNGMRSSVGNNSVMNGRMGMATLARDQSMNFQHQDLENQILNGLGTANGFNSLQFDWKSSP 878
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 38631724 38636676 + Bda000395.1 Bda13g01540 19671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01540 878 PANTHER LIM DOMAIN-BINDING PROTEIN 1 876 IPR029005 -
Bda13g01540 878 MobiDBLite consensus disorder prediction 587 630 - -
Bda13g01540 878 MobiDBLite consensus disorder prediction 155 178 - -
Bda13g01540 878 MobiDBLite consensus disorder prediction 118 138 - -
Bda13g01540 878 Coils Coil 602 622 - -
Bda13g01540 878 MobiDBLite consensus disorder prediction 668 688 - -
Bda13g01540 878 MobiDBLite consensus disorder prediction 668 750 - -
Bda13g01540 878 Pfam LIM-domain binding protein 332 586 IPR029005 -
Bda13g01540 878 Coils Coil 277 297 - -
Bda13g01540 878 MobiDBLite consensus disorder prediction 576 630 - -
Bda13g01540 878 MobiDBLite consensus disorder prediction 696 728 - -
Bda13g01540 878 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 876 - -
Bda13g01540 878 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01884 Bda-Chr7:36290989 Bda13g01540 Bda-Chr13:38631724 4.16E-115 dispersed
Bda01g01383 Bda-Chr1:49717568 Bda13g01540 Bda-Chr13:38631724 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01540 - - pper:18767394 1081.63