Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g01549 | ATGCAACCAACACCTGCTGGTGGACGTCGTGGCAGTGGTGGTGTCGGCAGCGAGGAAGAACCGAGTGACGGGGCCGGACTCGCTCGATTTCGCTCAGCTCCGGCGACCTGGTTAGAGGCTCTTCTGGACGAAGAAGAGGAAGACTTGTTGAAGCCTAATCAGTGCTTTACCCAGCTTCTTTCCAACAACTTAGACATACCCAGTTCTCAAAAATCGGTTTCTTTCAGTTCATCGACCGATCAGGATTTATTTCAGCTCGGGTCTTCGGATGGGTTTTTGAGGCAGAACAGTTCGCCGGCCGTCTTCCTAGCCAACGGCGGAATCGGGTCCGATGGATTCTTCCCCAATACCGGAATTTCAGCTTCCAACGGCTTCCAGCCGCCGAATATGGAAGTATCTCCGACGACGTCAAAAAGAGCTAGGGAAGCCAAAATCAGAAACATTCCTCCAAAATTTTCCGCTCAGAAAGAGGAGCAAAATGATGAGGTGCTTGGTGGGGTTTCGAGCTCTATCGACATGGAGATAGACAAGCTTTTGGAGGATTCAGTACCATGCCGAGTCCGTGCAAAGCGTGGCTGCGCTACGCACCCTCGCAGCATTGCAGAGAGGGTTCGAAGAACTCGCATTAGTGACAGGATAAGGAAGCTTCAGGAGTTGGTGCCTAATATGGATCGGCAAACAAACACTGCCGATATGCTAGAGGAGGCTGTAGAGTATGTCAAATATCTTCAGGGGCAGATTCAGGAACTGTCGGAGCATCAAAGGAGATGTACTTGCATGGGCAAAGAAGAGTAA | 795 | 50.82 | MQPTPAGGRRGSGGVGSEEEPSDGAGLARFRSAPATWLEALLDEEEEDLLKPNQCFTQLLSNNLDIPSSQKSVSFSSSTDQDLFQLGSSDGFLRQNSSPAVFLANGGIGSDGFFPNTGISASNGFQPPNMEVSPTTSKRAREAKIRNIPPKFSAQKEEQNDEVLGGVSSSIDMEIDKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDRQTNTADMLEEAVEYVKYLQGQIQELSEHQRRCTCMGKEE | 264 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 38701893 | 38703836 | + | Bda000406.1 | Bda13g01549 | 19680 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g01549 | 264 | MobiDBLite | consensus disorder prediction | 121 | 140 | - | - | |
Bda13g01549 | 264 | CDD | bHLH_AtbHLH_like | 198 | 251 | IPR045239 | - | |
Bda13g01549 | 264 | Gene3D | - | 194 | 263 | IPR036638 | GO:0046983 | |
Bda13g01549 | 264 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 193 | 243 | IPR011598 | GO:0046983 | |
Bda13g01549 | 264 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 19 | 261 | - | - | |
Bda13g01549 | 264 | PANTHER | TRANSCRIPTION FACTOR BHLH80 | 19 | 261 | - | - | |
Bda13g01549 | 264 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 196 | 257 | IPR036638 | GO:0046983 | |
Bda13g01549 | 264 | MobiDBLite | consensus disorder prediction | 121 | 136 | - | - | |
Bda13g01549 | 264 | Pfam | Helix-loop-helix DNA-binding domain | 198 | 244 | IPR011598 | GO:0046983 | |
Bda13g01549 | 264 | SMART | finulus | 199 | 249 | IPR011598 | GO:0046983 | |
Bda13g01549 | 264 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01378 | Bda-Chr1:49646025 | Bda13g01549 | Bda-Chr13:38701893 | 2.58E-128 | dispersed | |
Bda13g00261 | Bda-Chr13:3274217 | Bda13g01549 | Bda-Chr13:38701893 | 6.37E-35 | dispersed | |
Bda13g01549 | Bda-Chr13:38701893 | Bda01g01945 | Bda-Chr1:55838157 | 4.77E-18 | dispersed | |
Bda13g01549 | Bda-Chr13:38701893 | Bda03g01606 | Bda-Chr3:55356807 | 1.74E-38 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16942 | PF00010 | HLH | 4.90E-11 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g01549 | - | - | dzi:111315792 | 279.641 |