Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01578 ATGAAACCAGAGAGAATAGCAGTGGAAGAAGAGAGTGATAAGAAAGTTAACACGCAAGCAAGTTTTGTTCATCTGCGATTGATCGACATTCCTGAACAGAAGAGGAAAACCCATTACTTCCGCAGACGAAAGATGGTGTTGAACATAAAGCTATTTCTCTTTTACCTGTGCATATTTCACTGGGTGGGTACATTGTCTAGGACGGCACATGGCGCGACAACTCCAATGAAAGTCGGGGTGGTTCTTGATTTGGACATTTTTGCTGGGATTATGGGACTCAGCTGCGTCGAAATGGCACTCTCCGACTTCTACGCTTCTCATTCTCATTTCAATACCAGAATTCTCCTCCATACCAGAAACTCGAAGAGAGATGTCGTTGGAGCTGCTGCTGCAGTTCTGAATTTGATGAAGAATTTGGAAGTGCAAGCAATTATAGGACCACTTACTTCAATGGAGGCCAACTTCATAATCGAACTGGGAGAGAAAGCTCAAGTCCCCATCATTTCATTTACTGCAACAAGCCCATCACTCACCTCTCTACAGAGTCCTTATTTCTTTCGAATCACCCACAACGACTCCTCACAAGTAAAAGCCATTACTGACATCGTTCAAGCTTTTGGATGGCGAATGGTAGTACCCATCTACGAAGACGATAATTTCGGAGAAGGATGGATACCTTACTTGGCCGATTCTTTGCAAGAAGTCTATGCTCGAATCCCTTACAGAAGTGTCATCCCTCAATCAGCTTCTGATGATAGAATTGCTATGGAGCTTTACAAGCTGACATCAATGGAGACTAGAGTCTTCGTTGTCCATATGACACCTAATCTTTCCTCCAGGCTTTTTTCCAGAGCTAAAGAGATTGGAATGATGAGTAAAGGCTATGTTTGGATCATAACAGATGCCGTCACTAATATCCTACAGTCGATCAGTCCTTCGCTGTTGGACTCGATGCAAGGAGTTATAGGAGTGAGGACTTACGTACCAGCTTCGATTGAGCTCGATAATTTTTCAGTTCGATGGAGAAGGAAGTTCCAGCAAGACCATCCAACCATAGACAACCCTCAACTAAACGTGTTTGGCCTGTGGGGATATGACACTGCTTGGGCACTAGCAATGGCGGTTGAGGCAGTACAAGCTGGAAATCTTGGTTACCAGAAAGCAAATAGTTCCATTAACGATACAGATCTTGAAAATATTGGGGTGTCTCTAAAGGGTCGGGAAATTCGAGATGCATTGGCCAATACTACCTTTAAAGGACTCAGTGGGGAGTTTAGCCTCGTCAATGAACAATTACAGTCGCCAACTTTCGAGATAGTGAACATAAACGGTAGAGGAGGAAGAGTAGTAGGATTTTGGACACCTCAGACAGGATTGACAAAGACATTAAATTTAACTGGGAAAATCTCGTATTCTACTTCTGCGGATAGTCTAGGACCAATCATATGGCCTGGAGAATCCATGTCAGTTCCTAAGGGATGGGAAGTTCCACCCAGTGGGAAGAAATTGAGAGTTGGGGTACCTGTGAAGGATGGGTTTAGTGAATTTGTTACCGTAAAATTTGATTCTGTCACCAACACAACGGAGGTCACAGGCTACCGCATAGACGTATTCATGGCCGTTCTGGAAGAATTGCCATACGCCATAGTTCCGGAATTCATTCCCTTCGCAAAACCCACTAACGAAATGGCTGGAACTTATGATGATTTAGTCTACCAAGTTAACACAGGGGTGGGTAGTTCATAA 1746 43.81 MKPERIAVEEESDKKVNTQASFVHLRLIDIPEQKRKTHYFRRRKMVLNIKLFLFYLCIFHWVGTLSRTAHGATTPMKVGVVLDLDIFAGIMGLSCVEMALSDFYASHSHFNTRILLHTRNSKRDVVGAAAAVLNLMKNLEVQAIIGPLTSMEANFIIELGEKAQVPIISFTATSPSLTSLQSPYFFRITHNDSSQVKAITDIVQAFGWRMVVPIYEDDNFGEGWIPYLADSLQEVYARIPYRSVIPQSASDDRIAMELYKLTSMETRVFVVHMTPNLSSRLFSRAKEIGMMSKGYVWIITDAVTNILQSISPSLLDSMQGVIGVRTYVPASIELDNFSVRWRRKFQQDHPTIDNPQLNVFGLWGYDTAWALAMAVEAVQAGNLGYQKANSSINDTDLENIGVSLKGREIRDALANTTFKGLSGEFSLVNEQLQSPTFEIVNINGRGGRVVGFWTPQTGLTKTLNLTGKISYSTSADSLGPIIWPGESMSVPKGWEVPPSGKKLRVGVPVKDGFSEFVTVKFDSVTNTTEVTGYRIDVFMAVLEELPYAIVPEFIPFAKPTNEMAGTYDDLVYQVNTGVGSS 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39270395 39272476 + Bda000446.2 Bda13g01578 19709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01578 581 SUPERFAMILY Periplasmic binding protein-like II 480 577 - -
Bda13g01578 581 PRINTS Metabotropic glutamate GPCR signature 195 211 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bda13g01578 581 PRINTS Metabotropic glutamate GPCR signature 211 228 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bda13g01578 581 PRINTS Metabotropic glutamate GPCR signature 144 170 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bda13g01578 581 PRINTS Metabotropic glutamate GPCR signature 176 195 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bda13g01578 581 PANTHER OS06G0188250 PROTEIN 44 577 - -
Bda13g01578 581 CDD PBP1_GABAb_receptor_plant 77 463 IPR044440 -
Bda13g01578 581 Pfam Receptor family ligand binding region 94 444 IPR001828 -
Bda13g01578 581 SUPERFAMILY Periplasmic binding protein-like I 69 485 IPR028082 -
Bda13g01578 581 Gene3D - 403 502 - -
Bda13g01578 581 Gene3D - 193 360 - -
Bda13g01578 581 PANTHER OS06G0188250 PROTEIN 44 577 - -
Bda13g01578 581 Gene3D - 503 578 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01358 Bda-Chr1:49351516 Bda13g01578 Bda-Chr13:39270395 0 dispersed
Bda01g01359 Bda-Chr1:49406524 Bda13g01578 Bda-Chr13:39270395 0 dispersed
Bda13g01578 Bda-Chr13:39270395 Bda13g01579 Bda-Chr13:39292530 0 tandem
Bda01g01357 Bda-Chr1:49303673 Bda13g01578 Bda-Chr13:39270395 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01578 K05387 - qsu:112030675 640.573