Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01585 ATGAAAATGGTTCTGCGTAACGGTTCGAAGGTTTGGATCGAAGACAGAGAGTTTGCTTGGGTTGCCGCTGAAGTCATTGACCAAAGTGGTAAACAATTACGAGTCGTGACTGCTTCCGGGAAGAAGGTTTTGGCTTCTCCAGAGAAGGTGTTTCCAAGGGATGCAGACGAGGAGGATCATGGCGGAGTGGACGACATGACGAAGTTGACTTATTTGAATGAGCCTGGCGTGCTATATAATCTGCAGAGGAGATATTCTCACAACGAAATATATACGTACACAGGTAGCATTTTGATTGCCGTTAATCCATTCACAAAGCTTCCACATCTGTACAATATCCATATGATGGAGCAGTATAAGGGTGCTCCTTTTGGGGAACTCAGTCCTCATGTTTTTGCAGTTTCTGACGCTTCTTATAGGTCCATGATTAGTGATGGTCGAAGTCAATCCATATTAGTTAGTGGAGAAAGTGGGGCAGGTAAAACTGAAACAACGAAATTAATAATGCAGTATCTAACATTTGTTGGTGGTCGTGCTTCTGGTGATGATAGGACAGTTGAGCAACAAGTTCTTGAATCAAATCCACTCCTAGAGGCCTTTGGGAATGCAAGGACTGTTAGAAATGATAATTCAAGTCGTTTTGGCAAATTTGTAGAGATTCAGTTTGATGCTGATGGTAGAATATCTGGAGCTGCAATTAGGACTTACCTTTTGGAGAGATCTCGTGTTGTCCAGATAACAGATCCTGAGAGGAATTATCACTGCTTTTATCAGCTGTGTGCATCTGGGAGGGATGCAGAGAAGTATAATTTAGATCAACCAAGTAAATTCCACTATTTAAATCAAAGCAAGACCTATGAACTTGATGGGGTGAACAGTGCTGAGGAATACATGAAGACCAGGAGGGCGATGGATATAGTTGGCATAACTCGTGACGACCAGGAAGCTATCTTTCGAACATTGGCTGCAATATTGCATCTGGGCAACATTGAGTTTTCTCCTGGAAAGGAGCACGATTCATCAGCTATAAAGGATAAAAAATCTAGTTCTCATCTCCAAATGGCTGCTAATCTTTTCATGTGTGATGTGAATCTCTTAATATCAACTCTCTGTACGCGCACAATTCAAACCCTTGAAGGAAGTATTATCAAGGCTCTTGATTGTAATGCTGCAGTTGCTAGTCGGGATGCATTGGCAAAGACCGTTTATGCACGATTGTTTGACTGGCTTGTTGACAAGATTAATCAGTCTGTTGGACAAGACCCAAAATCGTCTATGCAAATTGGGGTGTTAGACATTTATGGATTTGAATGCTTTAAGGATAACAGTTTCGAGCAGTTTTGCATCAATTTCGCAAATGAAAAGCTTCAGCAGCATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAATATAGTAAAGAAGAAATTAACTGGAGCTACATTGAATTTATTGACAACCAGGATGTCCTCGATTTAATTGAGAAGAAACCTGTTGGGATAATTTCTCTTCTTGATGAAGCTTGCATGTTCCCAAGATCAACCCATGAAACTTTTTCAACCAAATTATTTCAGAACTTTCGGGGCCATCAAAGATTAGAAAAGGCAAAATTTTCAGAAACAGATTTTACGGTTTGCCATTATGCTGGAAAGGTCACTTATCATTCAGATACATTTTTGGAAAAAAATCGTGATTACGTAGTGGTAGAGCATTGCAATTTATTGTCTTCTTCCAAATGCACTTTTGTTGCTGGTCTATTCCCTTTACTCCCAGAAGAATCTTCTCGGTCTTCTTATAAGTTTTCTTCTGTGGCCTCTAGATTCAGGCAACAACTTCAAGCACTCATGGAGACCCTCAATTCGACAGAACCTCATTATATACGGTGCGTGAAGCCCAATTCTCTTAATCGGCCTCAGAAGTTTGAGAATCAAAGTATTCTACACCAACTACGATGTGGGGGTGTTTTAGAAGCTGTACGGATAAGTTTGGCTGGTTATCCCACTAGAAGAACGTATTCAGAGTTTTTAGATCGTTTTGGACTTTTGGCTCCTGAACTCATGGATGGAAGTTATGATGAAAAAGCTACAGCGGAGAAGATTTTACAGAAGTTAAAGCTTAGTAACTTTCAGTTGGGGAGGACAAAAGTGTTTCTTAGAGCTGGTCAAATTGGTGTTTTAGATGCTCGACGGTCAGAAGTATTGGATAATGCTGCAAAGTGCATTCAACGTAGACTGCGGACATATTATGCACACAAGGAATTCATCTTGATCCGATGTACTGCTGTTGAACTCCAAGCATACTGCAGAGGATATCTTACTCGAAAGATGTATACTGCAAAACGAGAAACCACTGCTGCTGTATTAATACAAAGAAATGTTCGCAAGTGGCTTTTACGACATGCTTATATAAAAATTCATTTTGCTGCTGTAGTTATACAGTCTAACATTCGTGGTTTCTTAACTCGACAAAAATTTTTGCATGGAAAGAAACATAAAGCAGCAACTTTAATTCAGGCTCGATGGAGAACATACAAAGTTCGTACTGCTTTCCGCCATGACCAAGCTTCCGTGGTTGCTATCCAGTGTCGTTGGCGACAAAAAGTGGCAAAAAGAGCACTTCAAAGGCTTAAGCAAGAGGCCAATGAGGCTGGAGCATTGCGATTAGCTAAAACTAAACTTGAGAAGCAAATAGAAGAGCTAACATGGCGGTTACATCTAGAAAAGCGACTGCGGGTTTCCAATGAAGAGGCCAAGTCCATTGAAATTTCAAAGCTTCAAAAGAGGTTGTCATCTCTTAACCTGGAGTTAGATGCCGCAAAATTAGCAACAATTAATGAGTGCAACAAAAATGAAGTGTTGCTGAATCAATTGGAATTGTCAGTGAAAGAGAAGTCTGCTTTGGAAAGAGAAATTATGACAATGGCAGAGTTGAGAAGGGAAAATGCATTGCTTAAAAATTCATTGAAAGCCCTGGAGAAAAAAGATTCAGCTCTGGACCTTGAGCTAATCAAGTATCAGAGAGAGAGTGATGAAACCATTGAGAAGCTGAAGGAAGTCGAAGAAAAATGTTCTCAGCTTCAGAAGAATGTGAAAAGTTTGGAGGGAAAACTCTTACTTCTAGAGAATGATAATCATGTCCTACGACAAAAGGCATTGAGTGCAACTCCAAAGAGCATCCGGTCTGGCATTATGAAGTCATTATCAGAGGTGTTGATTATCTTTGATTCTGCAATTGTTGTCTGGGAGTCACCGACTCCAACAAAACTTATTGCACCCTTTTCGCATGGCCTGACAGAATCTCGACGATCAAAGCTGATAATCGAAAGGCATCAGGAGAACTACGAATTCCTCTCTAAGTGTATTAAAGAGAATTTGGGCTTTAAAGGTGGTAAACCACTTGCTGCTAGCATCATATACAGATGTCTTCTTCATTGGCGTGCTTTTGAATCTGAAAGGACAGTTGTTTTTGACTTCGTAATTGAAGGGATCAATGAAGCTCTGAAGGTGACACACTTGTTTCACCCTTGTTCCATTCCAAGCAACATTGCTGCTTCCTTAAGTACCATTTATGAGATGACCATAGACCTTGTGTTTGAAAATTGGAATAAGACATCAATTATATTCTTTTTCTCTTCATGCGCCAACTTTCAACCTCCAACTACTCAGTGGGACAACATCATCAATTTTTTGGATTCTCTAATGAGTCAGTTGCTAATAAATCATGTACCCTCCTTCTTCATTCGAAAATTAATTACTCAAGTGTTTTCTTTCATCAACATATCACTTTTCAATAGTCTTCTTTTGCGCCGTGAATGTTGTACATTTTCAAATGGAGAATATGTGAAATGTGGGTTAGCAGAACTAGAGAAGTGGATTGTCAATTCCAAAGAAGAGTATGCGGGTACGTCATGGCATGAGCTAAATTATATAAGGCAAGCTGTTGGATTTCTGGTATTAAATCAGAAGAGGAAAAAATCACTTGAAGAGATAAGACAGGATCTTTGTCCGGCACTGACTGTTAGGCAAATTTATCGGATAAGTACAATGTACTGGGATGACAAATATGCTACCCAAAGTGTATCTAATGGGGTGGTTGCTGAAATGAGAGAGATTTTGAACAAGGAGAATCAAAACTTGACGTCCAATTCCTTTTTGTTGGATGATGATCTAAGCATTCCATTCTCTACTGAAGACATAGATATGGCTATTCCTGCTATAGACCCATCCGACATTGAACTACCCACTTCCTTATCAGAAAATCCCTGCGCACAGTTTTTGATTCGGCATTAA 4290 39.81 MKMVLRNGSKVWIEDREFAWVAAEVIDQSGKQLRVVTASGKKVLASPEKVFPRDADEEDHGGVDDMTKLTYLNEPGVLYNLQRRYSHNEIYTYTGSILIAVNPFTKLPHLYNIHMMEQYKGAPFGELSPHVFAVSDASYRSMISDGRSQSILVSGESGAGKTETTKLIMQYLTFVGGRASGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDADGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASGRDAEKYNLDQPSKFHYLNQSKTYELDGVNSAEEYMKTRRAMDIVGITRDDQEAIFRTLAAILHLGNIEFSPGKEHDSSAIKDKKSSSHLQMAANLFMCDVNLLISTLCTRTIQTLEGSIIKALDCNAAVASRDALAKTVYARLFDWLVDKINQSVGQDPKSSMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPVGIISLLDEACMFPRSTHETFSTKLFQNFRGHQRLEKAKFSETDFTVCHYAGKVTYHSDTFLEKNRDYVVVEHCNLLSSSKCTFVAGLFPLLPEESSRSSYKFSSVASRFRQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENQSILHQLRCGGVLEAVRISLAGYPTRRTYSEFLDRFGLLAPELMDGSYDEKATAEKILQKLKLSNFQLGRTKVFLRAGQIGVLDARRSEVLDNAAKCIQRRLRTYYAHKEFILIRCTAVELQAYCRGYLTRKMYTAKRETTAAVLIQRNVRKWLLRHAYIKIHFAAVVIQSNIRGFLTRQKFLHGKKHKAATLIQARWRTYKVRTAFRHDQASVVAIQCRWRQKVAKRALQRLKQEANEAGALRLAKTKLEKQIEELTWRLHLEKRLRVSNEEAKSIEISKLQKRLSSLNLELDAAKLATINECNKNEVLLNQLELSVKEKSALEREIMTMAELRRENALLKNSLKALEKKDSALDLELIKYQRESDETIEKLKEVEEKCSQLQKNVKSLEGKLLLLENDNHVLRQKALSATPKSIRSGIMKSLSEVLIIFDSAIVVWESPTPTKLIAPFSHGLTESRRSKLIIERHQENYEFLSKCIKENLGFKGGKPLAASIIYRCLLHWRAFESERTVVFDFVIEGINEALKVTHLFHPCSIPSNIAASLSTIYEMTIDLVFENWNKTSIIFFFSSCANFQPPTTQWDNIINFLDSLMSQLLINHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKCGLAELEKWIVNSKEEYAGTSWHELNYIRQAVGFLVLNQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYATQSVSNGVVAEMREILNKENQNLTSNSFLLDDDLSIPFSTEDIDMAIPAIDPSDIELPTSLSENPCAQFLIRH 1429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39355497 39386929 - Bda000453.2 Bda13g01585 19716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01585 1429 Pfam DIL domain 1250 1353 IPR002710 -
Bda13g01585 1429 Gene3D Myosin VI head, motor domain, U50 subdomain 310 600 - -
Bda13g01585 1429 SMART DIL_2 1249 1356 IPR002710 -
Bda13g01585 1429 ProSiteProfiles IQ motif profile. 830 859 IPR000048 GO:0005515
Bda13g01585 1429 ProSiteProfiles IQ motif profile. 805 834 IPR000048 GO:0005515
Bda13g01585 1429 PANTHER PROTEIN OPAQUE1-LIKE 1216 1427 - -
Bda13g01585 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 780 828 IPR027417 -
Bda13g01585 1429 SMART MYSc_2a 55 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g01585 1429 Gene3D - 251 308 - -
Bda13g01585 1429 Pfam Myosin N-terminal SH3-like domain 8 47 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bda13g01585 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 829 880 IPR027417 -
Bda13g01585 1429 PANTHER PROTEIN OPAQUE1-LIKE 6 1170 - -
Bda13g01585 1429 Gene3D - 666 732 - -
Bda13g01585 1429 Pfam IQ calmodulin-binding motif 808 825 IPR000048 GO:0005515
Bda13g01585 1429 Pfam IQ calmodulin-binding motif 785 802 IPR000048 GO:0005515
Bda13g01585 1429 Pfam IQ calmodulin-binding motif 831 851 IPR000048 GO:0005515
Bda13g01585 1429 Pfam IQ calmodulin-binding motif 761 775 IPR000048 GO:0005515
Bda13g01585 1429 Coils Coil 922 942 - -
Bda13g01585 1429 Gene3D Kinesin motor domain 64 661 IPR036961 -
Bda13g01585 1429 ProSiteProfiles IQ motif profile. 853 882 IPR000048 GO:0005515
Bda13g01585 1429 CDD MYSc_Myo11 75 719 IPR036018 -
Bda13g01585 1429 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
Bda13g01585 1429 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 6 55 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bda13g01585 1429 Coils Coil 950 1050 - -
Bda13g01585 1429 ProSiteProfiles Myosin motor domain profile. 61 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g01585 1429 Gene3D - 784 829 - -
Bda13g01585 1429 Gene3D - 733 783 - -
Bda13g01585 1429 Gene3D - 830 881 - -
Bda13g01585 1429 PRINTS Myosin heavy chain signature 148 173 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g01585 1429 PRINTS Myosin heavy chain signature 195 222 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g01585 1429 PRINTS Myosin heavy chain signature 427 455 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g01585 1429 PRINTS Myosin heavy chain signature 480 508 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g01585 1429 PRINTS Myosin heavy chain signature 91 110 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g01585 1429 Coils Coil 876 896 - -
Bda13g01585 1429 Gene3D - 437 622 - -
Bda13g01585 1429 ProSiteProfiles Dilute domain profile. 1157 1374 IPR002710 -
Bda13g01585 1429 SMART iq_5 733 755 IPR000048 GO:0005515
Bda13g01585 1429 SMART iq_5 781 803 IPR000048 GO:0005515
Bda13g01585 1429 SMART iq_5 829 851 IPR000048 GO:0005515
Bda13g01585 1429 SMART iq_5 804 826 IPR000048 GO:0005515
Bda13g01585 1429 SMART iq_5 756 778 IPR000048 GO:0005515
Bda13g01585 1429 Pfam Myosin head (motor domain) 63 719 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g01585 1429 PANTHER MYOSIN 6 1170 - -
Bda13g01585 1429 PANTHER MYOSIN 1216 1427 - -
Bda13g01585 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 779 IPR027417 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01348 Bda13g01585 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g00031 Bda-Chr13:504384 Bda13g01585 Bda-Chr13:39355497 2.72E-58 dispersed
Bda09g00366 Bda-Chr9:4676593 Bda13g01585 Bda-Chr13:39355497 3.66E-108 transposed
Bda14g00003 Bda-Chr14:22894 Bda13g01585 Bda-Chr13:39355497 2.28E-173 transposed
Bda14g00464 Bda-Chr14:3335313 Bda13g01585 Bda-Chr13:39355497 0 transposed
Bda01g01348 Bda-Chr1:49198409 Bda13g01585 Bda-Chr13:39355497 3.65E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01585 K10357 - jre:109010545 1907.88