Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01586 ATGAGGATTTGGTGTTGCTTATGCTTTACTGCAGGAGAAGACGAAGCGGAAGAGGGAGATAGAGAGATTACCATGAGGAAGGAGGGGGTAGAAAATGAGGGAAATCCTGAGGCTTTTCTTGAAAATGACGATGAATATGGATTAGGGCTTGTTGTTGATAGTCCTGCGCCTGATCAAAGAAGCATGTTGAGAGTGTTTCAGGAGACGGATAGAGCAATGCCAGGTGATGCCGATGGTCATTGTGAGGTGGGTTTAACTTCTCCCGTACTTAACCCTTGGGAGTTTCGGTATTGGGTTTCAAGCTGTACCGAGGGCGTGAGCAGTAGTAGTTCAGTTTCGGGTGCAGCGATTTGGGTGGGGGAAAATTGTATCGAGGAGTCTGATCGTGATCCTCACCACAAGCGAGCCAAAGTTCACTCTGATTCTTGTGGGTGCTCTTCTGCTTCTGTAATTTCTTTAGATGCTGGAAATGCTTCTTGCATGGATTTGAATTTTGATATTAGTCACGGATCCTCTCTTACATCTAAAACTGAGTGTGTGTATCAATCTTTTACATTGATTAATGCTGGTGGTGATTTTCCTTTTGGCTTCAGCAGTGGCAAAGATGACTCTGAGAGAAAGGACTATAAAACAGAGGATTTAGAAATTCGGATGGATCTTACAGATGACTTGTTGCACTTGGTTTTCTCTTTCTTGGACCACATAAATCTTTGTCGAGCTGCTAGTGTCTGTAGGCAATGGCGAGTGGCTAGTGCACATGAAGATTTTTGGAGTTTCACTCATCTTGCGATCTCTTTTTATACAGAAGTTACTTATATATTGATAAAAAGAGATTTGTTGCAGCCACTTACACATTCATATGTTCATAGAAATTTTGAAGTCTTAACTTTGGGGAAAGGTCTTCTGGGAGACACATTCTTCCATGCCTTAGCAGATTGCCAGACATTGAAGACGTTGAATGTTAATGATTCTACACTTGGTAATGCTATTCGAGAGATTCCGATAAACCATGATCGACTGCGCCATCTTTATCTGACAAAATGTCGAGTCATATGCATATCTGTCAGGTGCCCACAACTTGAGACATTGTCTTTGAAGCGCAGTAATATGGCACAAGCTATACTCAATTGTCCTCTTTTGCGCGATCTAGATATAGGCTCTTGCCGCAAGCTTTCTGATGCTGCAATTCGTTCGGCAGCTATGTCATGTCCTCTGTTAGAATCTTTAGATGTGTCAAATTGTTCGTGTATTAGCGATGAAACAATATGTGAAATAGCCCGCCTTTGTCCAAATCTCCATATTTTGAACGCGTCATACTGCACTCATATATCTTTGGAGTCTGTTAGGCTGCCAATGTTGACAGTTCTTAAGCTTCACAGCTGCGAGGGTATTACTTTGGCATCAATGGCTGCAATATCCCGATTTTATATGCTTGAGGTTTTGGAGCTTGACAATTGTAGCCTTCTAACTTCTGTGTCCTTGGACCTTCCACACTTGCATAGTATTCGCCTTGTTCATTGTCGCAAATTTGCTGATCTGAATTTACGGAGTGTCATGCTATCATCCATTATGGTGTCTAATTGTCCGGCCCTCCACCGTGTCAACATCACGTCAAATGCACTTCAAAAATTAGCATTGCAGAACCTAGAAAGCTTAATTACCTTGGCTCTGCAATGCCCAAGTTTGCAGGAAGTGGACCTCACTGATTGTGAATCTCTCTGGAATTCTATCTGTGAGGTTTTTGGTGATGCTGGTGGGTGCCCTGTGCTGAAGTCGTTAGTTCTCGATAATTGTGTGAGTTTGACAGCAGTCCGATTTTGCAGCACCTCCTTAGTTAGTCTTTCTCTTGTCGGTTGTCGGGCCATCACAACTCTCCAGCTTACATGCCCCATCCTCGAGAGAGTGTGTTTAGATGGATGTGATCATCTTGAAATGGCATCATTTTGTCCTGTAAGTAATAATTGTTTATTTGGTTTGCTGATTTCCTACCCTTGTATAACTGTGATTTTTGATATTCTCTTTCAGGTTGGTCTAAGATCACTTAATCTGGGTATATGTCCCAAATTGAATGAACTTAGAATTAAAGCCCCTCATATGGCTATACTCGAGCTTAAAGGCTGTGGAGGGTTATCTGAAGCATCCATTGACTGTCCATTGTTGTCATCGCTGGATGCTTCTTTTTGCAGCCTACTGCGGGATGACTGCTTGTCTGCAACGGCTGCTTCGTGTTTACAGATCGAGTCTTTAATATTGATGTCTTGTCCGACTGTTGGTCCAGATGGACTATGCTCATTGGGTCGTCTTTCGCGCTTGATCATTCTTGACTTGTCGTATACCTTTTTGATGAACTTAAAGCCGGTCTTTGAGTCTTGTATGCAACTGAAGGTGTTGAAGTTGCAGGCTTGCAAGTACTTAACTGACTCATCTTTGGAACCTCTTTACAAAGAAGGTGCTCTTCCAGCTTTGCGGGAATTGGACTTATCGTATGGGACTTTCTGCCAGTCATCTATGGAGGAGCTTCTCACTTGCTGCACCCATCTCACGCATGTTAGCCTGAATGGCTGCGTGAATATGCATGATCTAAATTGGAGCTGCCATGACAGTAAGCTCTCTGAGTTGTATAGGGTAGACAGCTCCTCTTCTTGGGTTTCTGCTTTGGATGTCATGGAGCCAACCGAAGGAGCAAATCGCTTATTGCAAAACCTCAACTGTGTTGGCTGTCCAAATATTAGGAAAGTTCTCATTCCCCCATGGGCACGGTGTTTCGACCTGTCGTCTCTGAACCTTTCTCTATCTTCCAATTTGAGGGAAGTTGATGTTTCTTGCTTCAATCTGTGCTTTCTCAATTTAAGGTTTGAATCTATTCCAGCTTGTAAGCTGAAGTTTTTTCTTGATTTCTGTGCTGATAAATTATTTTATTTGTCTGTCAGCAATTGTTGCTCGTTGGAAGTCTTGAGATTGGACTGCCCCAAATTGAGTAGTCTCTTTCTTCAGTCGTGCAACATTGATGAAGAAGCTGTTGAAGCTGCCATAGCCAAATGTAGCATGCTCGAGACCTTGGACGTCCGCTTTTGCCCGAAGATTTCCTCAATGAGCATGATTCGAATGCGGATGGCTTGCTCGAGTTTGAAGCGGATCTTCAGCAGTTTGTCTCTCATATGA 3162 42.98 MRIWCCLCFTAGEDEAEEGDREITMRKEGVENEGNPEAFLENDDEYGLGLVVDSPAPDQRSMLRVFQETDRAMPGDADGHCEVGLTSPVLNPWEFRYWVSSCTEGVSSSSSVSGAAIWVGENCIEESDRDPHHKRAKVHSDSCGCSSASVISLDAGNASCMDLNFDISHGSSLTSKTECVYQSFTLINAGGDFPFGFSSGKDDSERKDYKTEDLEIRMDLTDDLLHLVFSFLDHINLCRAASVCRQWRVASAHEDFWSFTHLAISFYTEVTYILIKRDLLQPLTHSYVHRNFEVLTLGKGLLGDTFFHALADCQTLKTLNVNDSTLGNAIREIPINHDRLRHLYLTKCRVICISVRCPQLETLSLKRSNMAQAILNCPLLRDLDIGSCRKLSDAAIRSAAMSCPLLESLDVSNCSCISDETICEIARLCPNLHILNASYCTHISLESVRLPMLTVLKLHSCEGITLASMAAISRFYMLEVLELDNCSLLTSVSLDLPHLHSIRLVHCRKFADLNLRSVMLSSIMVSNCPALHRVNITSNALQKLALQNLESLITLALQCPSLQEVDLTDCESLWNSICEVFGDAGGCPVLKSLVLDNCVSLTAVRFCSTSLVSLSLVGCRAITTLQLTCPILERVCLDGCDHLEMASFCPVSNNCLFGLLISYPCITVIFDILFQVGLRSLNLGICPKLNELRIKAPHMAILELKGCGGLSEASIDCPLLSSLDASFCSLLRDDCLSATAASCLQIESLILMSCPTVGPDGLCSLGRLSRLIILDLSYTFLMNLKPVFESCMQLKVLKLQACKYLTDSSLEPLYKEGALPALRELDLSYGTFCQSSMEELLTCCTHLTHVSLNGCVNMHDLNWSCHDSKLSELYRVDSSSSWVSALDVMEPTEGANRLLQNLNCVGCPNIRKVLIPPWARCFDLSSLNLSLSSNLREVDVSCFNLCFLNLRFESIPACKLKFFLDFCADKLFYLSVSNCCSLEVLRLDCPKLSSLFLQSCNIDEEAVEAAIAKCSMLETLDVRFCPKISSMSMIRMRMACSSLKRIFSSLSLI 1053
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39389216 39395699 - Bda000454.2 Bda13g01586 19717

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01586 1053 SUPERFAMILY RNI-like 288 508 - -
Bda13g01586 1053 Gene3D Ribonuclease Inhibitor 450 606 IPR032675 -
Bda13g01586 1053 Gene3D Ribonuclease Inhibitor 211 449 IPR032675 -
Bda13g01586 1053 Gene3D Ribonuclease Inhibitor 607 782 IPR032675 -
Bda13g01586 1053 SUPERFAMILY F-box domain 218 266 IPR036047 GO:0005515
Bda13g01586 1053 SMART fbox_2 220 260 IPR001810 GO:0005515
Bda13g01586 1053 Pfam F-box domain 219 257 IPR001810 GO:0005515
Bda13g01586 1053 Gene3D Ribonuclease Inhibitor 981 1051 IPR032675 -
Bda13g01586 1053 PANTHER OS10G0396666 PROTEIN 126 1014 IPR044703 GO:0010252|GO:1905393
Bda13g01586 1053 PANTHER OS10G0396666 PROTEIN 126 1014 - -
Bda13g01586 1053 SUPERFAMILY L domain-like 712 1046 - -
Bda13g01586 1053 Gene3D Ribonuclease Inhibitor 783 873 IPR032675 -
Bda13g01586 1053 SMART LRR_CC_2 1014 1049 IPR006553 -
Bda13g01586 1053 SMART LRR_CC_2 717 742 IPR006553 -
Bda13g01586 1053 SMART LRR_CC_2 403 428 IPR006553 -
Bda13g01586 1053 SMART LRR_CC_2 377 402 IPR006553 -
Bda13g01586 1053 SMART LRR_CC_2 587 617 IPR006553 -
Bda13g01586 1053 SMART LRR_CC_2 450 475 IPR006553 -
Bda13g01586 1053 SMART LRR_CC_2 629 654 IPR006553 -
Bda13g01586 1053 SMART LRR_CC_2 559 576 IPR006553 -
Bda13g01586 1053 SMART LRR_CC_2 791 816 IPR006553 -
Bda13g01586 1053 SMART LRR_CC_2 989 1013 IPR006553 -
Bda13g01586 1053 SMART LRR_CC_2 743 768 IPR006553 -
Bda13g01586 1053 SMART LRR_CC_2 528 552 IPR006553 -
Bda13g01586 1053 SUPERFAMILY RNI-like 449 641 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01586 - - - qsu:111997858 1260.36
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda01g01346 Bda13g01586 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01586 Bda-Chr13:39389216 Bda03g01248 Bda-Chr3:17846906 1.83E-08 dispersed
Bda14g00730 Bda-Chr14:5522521 Bda13g01586 Bda-Chr13:39389216 5.27E-06 transposed
Bda01g01346 Bda-Chr1:49168364 Bda13g01586 Bda-Chr13:39389216 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g161 . . . . Bpe02g01559 . . . . . . . Car09g00313 . . . Cpe06g00258 . . . . . . . Cla05g01626 . . . Clacu05g1726 . Cre05g1739 . . . . Lsi04g01388 . . . Blo17g00273 Blo18g00056 Bda01g01346 Bda13g01586 Bpe14g00280 . Bma01g00911 Bma02g00548 Sed05g1794 Cmo01g01810 . . . Car01g01319 . . Cpe02g00290 Bhi09g03083 Tan01g3471 Cmetu07g1629 . Hepe01g1916 Mch11g0451 . . . . . . . . . . . Cme07g00176
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004724 2 1 1 2 2 1 2 1 1 1 1 1 2 1 1 1 1 4 2 1 1 1 1 1 1 1 1 4 1 1 42