Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01602 TCTGTATACTTTTCTTCAATTTGGCCGGAAAAAGTGTTGCTTTTGCCTACAATTACAGAATCTATGAATGCGGCCACGTGTGTGGACACCAAATCAGAACTCTGCCGTGATGACTCGGCTGCTTTCATTCTCAAATTCATAGCCATGGCTTCCATTCTTGTCGCCGGAGTGGCGGGAATTGCCATTCCACTTGTCGGTAGACACCGGAGTTTCCTCAAAACAGACAATAACCTCTTTGTTGCAGCAAAAGCCTTTGCTGCCGGTGTGATCCTCTCGGCCGGATTTGTACACATGCTCTCTGCCGGGTCGGCGGCTCTGTCCAGCTCGTGTCTGCCCACTTTTCCTTGGTCCAAGTTTCCATTTTCTGGGTTTTTTGCTATGCTTGCAGCTCTCGTGACCCTTCTGGTTGATTTTGTTGGGACTCAATATTTCGAGAGAATGCAGGGACTGAGTCGATGTTATGAGGAGAAGGGTCAAGTTGGGACATTAGAGGCGGGGTTCGAATCTGAAATTGTTCCCATCGAGGAGGCTAAAAAGTGGAGTGGCGATGTGTTGGGGGAGGGAGAAGGAGATGGAATGAAGATAGTGGGAATGCATTCTGGTGGGATTCGAAATGGTGAGGAGGAGATCGATGTTCGACATGTTGTGGTTTCTCAGATTCTAGAACTAGGAATCGTGTCACACTCCGTGATCATCGGCTTATCGCTTGGCGTTTCGCACAGTCCGTGCACGATAAGACCCTTAATTGCAGCTTTATCCTTCCACCAGTTCTTCGAAGGATTTGCGCTCGGACGATGCATCTCCAAAGCGCAATTTGATCCCAAAACCGCTACGATCATGGCCTGCTCTTTCGCCGCCACGACTCCGATCGGGATCAGTGCGGGGATGACCGTTGCATCTTTCTACAATCCTCTGAGCTCCGGCGCATTGGTCGCCGAAGGGGTATTCGATTCTCTTTCTGCCGGGATTCTGGTTTACATGGCCTTGGTGGATCTCATAGCAGCTGATTTTGTAAGCAAGAGAATGAGGTGCAATTTTAGACTGCAAGTAGTGTCTTATTTCATGCTTTTCTTTGGGGCTGGATTGATGTCTTTGCTTGGTATATGGGCTTGA 1113 48.88 SVYFSSIWPEKVLLLPTITESMNAATCVDTKSELCRDDSAAFILKFIAMASILVAGVAGIAIPLVGRHRSFLKTDNNLFVAAKAFAAGVILSAGFVHMLSAGSAALSSSCLPTFPWSKFPFSGFFAMLAALVTLLVDFVGTQYFERMQGLSRCYEEKGQVGTLEAGFESEIVPIEEAKKWSGDVLGEGEGDGMKIVGMHSGGIRNGEEEIDVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGRCISKAQFDPKTATIMACSFAATTPIGISAGMTVASFYNPLSSGALVAEGVFDSLSAGILVYMALVDLIAADFVSKRMRCNFRLQVVSYFMLFFGAGLMSLLGIWA 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39575469 39576710 + Bda000473.1 Bda13g01602 19733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01602 370 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 22 370 - -
Bda13g01602 370 TIGRFAM zip: ZIP zinc/iron transport family 27 370 IPR004698 GO:0005385|GO:0016021|GO:0071577
Bda13g01602 370 PANTHER ZINC/IRON TRANSPORTER 22 370 - -
Bda13g01602 370 Pfam ZIP Zinc transporter 42 366 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02112 Bda-Chr1:57172365 Bda13g01602 Bda-Chr13:39575469 1.43E-67 transposed
Bda07g00889 Bda-Chr7:10399557 Bda13g01602 Bda-Chr13:39575469 7.01E-68 transposed
Bda09g00434 Bda-Chr9:5767452 Bda13g01602 Bda-Chr13:39575469 6.25E-06 transposed
Bda09g00576 Bda-Chr9:8064813 Bda13g01602 Bda-Chr13:39575469 1.30E-96 transposed
Bda14g00494 Bda-Chr14:3589392 Bda13g01602 Bda-Chr13:39575469 4.23E-91 transposed
Bda01g01328 Bda-Chr1:48894238 Bda13g01602 Bda-Chr13:39575469 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01602 K14709 - pvy:116142521 483.411