Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01606 ATGATAAGAGTGTCATTTCTGTCCGAGCCTCGCCTTTTCTTCATCTCAACTCCAATTCTCTTCGTTTTTTGTTCGACGGTTTTATTTTCGTCGGTTTCTTTCGCCGCTCTTCCGGTGACGGAGTTGGATCCGTCCTTGCTTCTCAACAGCACCACCGACTCCGTTAACGCATCCGTATCTAGGAATAAGGAGGGTAGTTTTGCAGACATTATTGATCGAGCTCTGGAGAATGAATTTAAAGAGAGTGATCAGAACGAAGCAACTGATAAAGCTGGAAGCTTCAACAGCAGTGTGGCGGAGCAGCAGGCTGTTTTGGAGACTGTGGCACGGGTTAAGCCGAAGAAAAATGAAACCAAAGAGGAAAAATCATTTCAACTTCATGATGTTTTCAACTTGGACAATGATAACAGAGCAGAAGATACACCGACACTGATAGATCGCAAGGACAATGTATTTATTATATCTAACTTCAAATCAAAATATCCAGTGCTGCAATTAGACTTGAGATTAATATCAGATTTGGTAGTTGTTATTGTATCTGCAACTTGTGGAGGAATTGCGTTTGCTTGTGCTGGACAACCAAACATTATGATATTTACCTTATTGTGTTATCAACAGGTTATCACTGGATATTTGCTCGCTGGATCTGTTATTGGACCCGGAGGATTCAACTTTGTCAGCGAAATGGTGCAAGTCGAAACTGTTGCTCAGTTTGGTGTAATTTTTCTTCTTTTTGCACTAGGCCTGGAATTCTCAACAGCGAAGCTTCGAGTTGTTAGAGCAGTTGCTGTTCTAGGGGGACTGCTGCAAATTTTGCTATTTATGTGCCTCAGTGGAATCACCGCTTCATTGTGTGGTGGAAATGCTTCGGAGGGAGTATTTGTTGGCACATTTCTTTCAATGTCTTCAACAGCTGTGGTTTTGAAGTTTTTGATGGAAAAGAACTCGACAAATGCTCTTCATGGCCAAGTAACCATTGGCACTCTTATCATGCAGGATTGTGCCGTAGGTTTGCTGTTTGCTTTCCTTCCTGTTCTGGGTGGGACTTCTGGTGTGCTTCAAGGAGTAATTTCCATGACTAAACTGTTACTTGTATTGATTGCATTCCTTGCTATTTTGTCAATGCTATCCCGTACATGCATTCCCTGGCTACTTAAATTGATGATAAACCTATCAGCACAGGACGAATTGTATGTTATATCCTTGCCAAAAATTACTCAACTGTATTTTGAGTTTGAGCCGCCTTTTAAAGTTGATTTGTTCCATATTTACTTTTTGCAGACCAATGAGCTCTATCAACTGGCGGCAGTTGCATTCTGCTTGATTGTTGCCTGGTGTAGTGACAAGCTGGGACTAAGTTTAGAACTGGGTTCCTTTGCGGCTGGAGTGATGATATCGACGACTGATCTTGCTCAACACACGCTAGAACAAATTGAACCCATACGAAATTTTTTTGCGGCTCTTTTCCTTGCAAGCATTGGGATGCTGATCCATGTTCAGTTTCTTTGGAATCACGTTGATATCTTACTTGCATCTGTTATTTTAGTCTTCATTGTGAAAACAATTATCATCAGCACTGTGGTAAAGGGATTTGGTTACAACAACAAGACATCACTTCTTGTTGGCATGTCTCTGGCTCAGATTGGAGAATTTGCTTTTGTTCTTCTCAGTCGTGCTTCTAATCTTCATTTAGTTGAGGGTAAATTGTATCTTCTGCTTATCGGGACCACAGCGCTCAGTTTGGTGACAACACCTTTTCTTTTCAAGTTAATTCCTGCTGTGGTGCATCTAGGTGTGTTATTGCGGTGGTTCTCTCCGGACAGTTCTGTTGAGATTGGATTTAAATCCGATAACATTCGGTCGGAGAGTGTCAAGCAGCGAGTTATGCTGACAGTCCAAGGATCACACGATTTGTAA 1917 41.68 MIRVSFLSEPRLFFISTPILFVFCSTVLFSSVSFAALPVTELDPSLLLNSTTDSVNASVSRNKEGSFADIIDRALENEFKESDQNEATDKAGSFNSSVAEQQAVLETVARVKPKKNETKEEKSFQLHDVFNLDNDNRAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPNIMIFTLLCYQQVITGYLLAGSVIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTAKLRVVRAVAVLGGLLQILLFMCLSGITASLCGGNASEGVFVGTFLSMSSTAVVLKFLMEKNSTNALHGQVTIGTLIMQDCAVGLLFAFLPVLGGTSGVLQGVISMTKLLLVLIAFLAILSMLSRTCIPWLLKLMINLSAQDELYVISLPKITQLYFEFEPPFKVDLFHIYFLQTNELYQLAAVAFCLIVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNFFAALFLASIGMLIHVQFLWNHVDILLASVILVFIVKTIIISTVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPFLFKLIPAVVHLGVLLRWFSPDSSVEIGFKSDNIRSESVKQRVMLTVQGSHDL 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39592533 39599389 + Bda000477.2 Bda13g01606 19737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01606 638 PANTHER K(+) EFFLUX ANTIPORTER 6 425 637 - -
Bda13g01606 638 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 425 637 IPR045158 GO:0015386|GO:0071805|GO:1902600
Bda13g01606 638 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 25 400 IPR045158 GO:0015386|GO:0071805|GO:1902600
Bda13g01606 638 Pfam Sodium/hydrogen exchanger family 423 589 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bda13g01606 638 Pfam Sodium/hydrogen exchanger family 175 398 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bda13g01606 638 PANTHER K(+) EFFLUX ANTIPORTER 6 25 400 - -
Bda13g01606 638 Gene3D - 415 596 IPR038770 -
Bda13g01606 638 Gene3D - 168 402 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01606 Bda-Chr13:39592533 Bda01g02293 Bda-Chr1:59663877 1.60E-07 dispersed
Bda06g00656 Bda-Chr6:9124956 Bda13g01606 Bda-Chr13:39592533 0 transposed
Bda11g00262 Bda-Chr11:3058379 Bda13g01606 Bda-Chr13:39592533 2.71E-36 transposed
Bda13g00796 Bda-Chr13:9399252 Bda13g01606 Bda-Chr13:39592533 3.50E-11 transposed
Bda15g00485 Bda-Chr15:8010253 Bda13g01606 Bda-Chr13:39592533 4.81E-22 transposed
Bda01g00616 Bda-Chr1:33154470 Bda13g01606 Bda-Chr13:39592533 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01606 - - csv:101217282 916.761