Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01611 CTCTTACAAATTACAATATCATCTTCCGTTCTTATAAAGAGAATCCATAGTCTCCGGGCAGATTTTCCAATTCACCGGCCAAAGCAACCGATGACTTCCGCAGCAATCAATTCTCTTATCCTTCTCACTATCTTCAGTTTTGCCTGCGGTAGCCGAGATCTTACTGGAGACTTTATCCGACTACCTTCCGAGGCTTCGAGATTTTTTCGCAGAGGTGGTGCTGATTATGGCGATGATGTCACTGTAGGGACCCGATGGGCTGTACTGATTGCTGGCTCCAACGGATATTGGAATTATAGGCACCAGGTTAAGATTCATTTGATCCAAAATATTGTTTTTATTTTGTTTCTGTTTAGACGTTTTTTAATAGTTTCTAAATATTATGGCTCGTACTATGGAAAGAATGAACTGATAACGAGCCTAGTTTTCTATTCCTCCCAGGCTGACGTATGCCATGCTTATCAACTGTTGAGGAAAAATGGGCTAAAAGATGAGAATATCGTTGTATTTATGTACGACGACATCGCTTTAAATGAAGAAAATCCAAGACCCGGAGTCATAATTAACAGTCCAACTGGCAATGATGTTTATGAAGGAGTTCCAAAGGATTACACTGGGGATGATGTTACTGTCGACAACTTTTTTGCCGTAATTTTGGGAAATAAAACCGCTATTACTGGGGGCAGTGGAAAGGTGGTTAATAGTGGTCCTGATGACCATATTTTCATATATTATACCGATCATGGTGGCCCAGGTGTGCTCGGTATGCCTACAAATCCTTACATGTATGCTAACGATTTGATTGAAGTATTAAAGAAGAAGCATGCTTCTGGAACTTACAGTAGTTTGGTATTCTATCTCGAGGCTTGTGAATCTGGAAGTATATTTGAGGGTCTTCTTCCAGAAGGTTTAAATATCTATGCAACCACAGCAGCAAATGCAGTTGAGAGCAGTTGGGGAACCTACTGTCCTGGGGAATATCCTGGCCCTCCCCCAGAATACGAGACTTGCTTGGGTGACTTATATAGCGTTGCCTGGATGGAAGACAGGTATGCACTAAACAAATTCACCCCTAACTTCTGTCTTTTGCACAGTGATATACACAATTTGCAGTCTGAAACTTTGCGTCAGCAATATGAACTGGTGAAGAAGAGGACATTGAATGGTAACGATGCCTACGGTTCTCATGTTATGCAGTATGGTGATACTGAACTTGGAAAAAACAATCTGTTTTTATATATCGGTACGGATCCTGAAAATGAAAACTACACTTTTGTGGATGAAAATTCCTTGAAGCTCTCATCAAAAGTTGTCAATCAGAGGGATGCTGACCTGCTCCATTTTTGGGATAAGTTCCGCAAAGCACCTGAGGGCTCTGCAAGAAAGATTGAAGCCCAAAAGCAGTTTTTCGAAGCAATGTCACATAGAATGCATATAGACAACAGTGTGAAATTAGTTGTAAAGTTATTATTTGGAATCAAAAAGGCTTCAGAGGTGTTTGATTCTGCGCGTCCTTCTGGACAGCCTCTCGTAGATGACTGGCAGTGTCTCAAGACTCTGGTGAGAACATTCGAGACACATTGTGGATCCATATCTCAATATGGCATGAAACACATGCGCACCTTTGCAAATATCTGTAACGCCGGAACTCAGATGGATCAGATGGCTCAGGCATCAGTTCAAGCTTGCACCAATGTGCCAAACAGTCGATGGAACTCACTTCGCGGGGGATTTAGTGCATGA 1743 41.82 LLQITISSSVLIKRIHSLRADFPIHRPKQPMTSAAINSLILLTIFSFACGSRDLTGDFIRLPSEASRFFRRGGADYGDDVTVGTRWAVLIAGSNGYWNYRHQVKIHLIQNIVFILFLFRRFLIVSKYYGSYYGKNELITSLVFYSSQADVCHAYQLLRKNGLKDENIVVFMYDDIALNEENPRPGVIINSPTGNDVYEGVPKDYTGDDVTVDNFFAVILGNKTAITGGSGKVVNSGPDDHIFIYYTDHGGPGVLGMPTNPYMYANDLIEVLKKKHASGTYSSLVFYLEACESGSIFEGLLPEGLNIYATTAANAVESSWGTYCPGEYPGPPPEYETCLGDLYSVAWMEDRYALNKFTPNFCLLHSDIHNLQSETLRQQYELVKKRTLNGNDAYGSHVMQYGDTELGKNNLFLYIGTDPENENYTFVDENSLKLSSKVVNQRDADLLHFWDKFRKAPEGSARKIEAQKQFFEAMSHRMHIDNSVKLVVKLLFGIKKASEVFDSARPSGQPLVDDWQCLKTLVRTFETHCGSISQYGMKHMRTFANICNAGTQMDQMAQASVQACTNVPNSRWNSLRGGFSA 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39623697 39627486 + Bda000482.2 Bda13g01611 19742

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01611 580 PIRSF AE 139 580 IPR043577 GO:0004197|GO:0051603
Bda13g01611 580 PIRSF AE 30 112 IPR043577 GO:0004197|GO:0051603
Bda13g01611 580 Gene3D - 83 439 - -
Bda13g01611 580 PANTHER HEMOGLOBINASE FAMILY MEMBER 37 107 IPR001096 GO:0006508|GO:0008233
Bda13g01611 580 PANTHER HEMOGLOBINASE FAMILY MEMBER 144 579 IPR001096 GO:0006508|GO:0008233
Bda13g01611 580 Pfam Peptidase C13 family 144 415 IPR001096 GO:0006508|GO:0008233
Bda13g01611 580 Pfam Peptidase C13 family 85 110 IPR001096 GO:0006508|GO:0008233
Bda13g01611 580 PRINTS Hemoglobinase (C13) cysteine protease signature 203 218 IPR001096 GO:0006508|GO:0008233
Bda13g01611 580 PRINTS Hemoglobinase (C13) cysteine protease signature 156 185 IPR001096 GO:0006508|GO:0008233
Bda13g01611 580 PRINTS Hemoglobinase (C13) cysteine protease signature 280 296 IPR001096 GO:0006508|GO:0008233
Bda13g01611 580 PRINTS Hemoglobinase (C13) cysteine protease signature 131 155 IPR001096 GO:0006508|GO:0008233
Bda13g01611 580 PRINTS Hemoglobinase (C13) cysteine protease signature 231 250 IPR001096 GO:0006508|GO:0008233
Bda13g01611 580 PIRSF Legumain 139 580 IPR001096 GO:0006508|GO:0008233
Bda13g01611 580 PIRSF Legumain 31 111 IPR001096 GO:0006508|GO:0008233
Bda13g01611 580 Gene3D - 440 570 IPR046427 -
Bda13g01611 580 PANTHER VACUOLAR-PROCESSING ENZYME 37 107 - -
Bda13g01611 580 PANTHER VACUOLAR-PROCESSING ENZYME 144 579 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01611 K01369 LGMN; legumain [EC:3.4.22.34] - rcu:8275625 763.451
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda01g01323 Bda13g01611 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01186 Bda-Chr7:14270480 Bda13g01611 Bda-Chr13:39623697 2.09E-15 dispersed
Bda08g00562 Bda-Chr8:5709864 Bda13g01611 Bda-Chr13:39623697 6.42E-168 dispersed
Bda01g01323 Bda-Chr1:48843677 Bda13g01611 Bda-Chr13:39623697 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g53 . . . . Bpe02g01534 . . . Cmo05g00111 Cmo12g00569 . Cma05g00105 . Car12g00576 Sed08g1757 Cpe07g00549 . Bhi04g00491 Tan02g1654 Cmetu02g1720 . Hepe08g1379 . Lcy13g2174 . . . . . . . Cone4ag1649 Cone7ag1300 . Cone20ag0258 . . . . Blo17g00296 Blo18g00291 Bda01g01323 Bda13g01611 Bpe14g00254 . Bma01g00929 . . . . . Cma12g00628 . Car05g00091 Cpe11g00085 . . . . . . . . . . . . . . . Lsi08g01572 Csa02g01849 Chy03g01635 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005098 2 1 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 2 1 2 41