Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01627 ATGGAAGCTTCTCTCTCCCCCTTCTTCGTCTTCTTCTTCTTCTCCGCCGTCTCTCTCCTCATTCAAGCATTTGCCGACTCTCGGGCCGACCTCGTCGCCAGGTCCTGCAGGCACAATCACGCATTGCACCCGACGAGTTACAGTAAATGCTATTTCAGGATGGTGAGGGATTTGGAGAAAGAGTTGGAGCATGACAAGTTTGCTCTTGGGGTAGCGGGGGAGCCACCTCAGAGACTCTATTTTTATGCGCAATGCAATGAAGATCTTTCCTCTGAAGATTGTAGACAGTGCTTTGATGTTATAAAGAAGATGTTGCCGAGCTGCTTTCCGGCGACTGGAGGCCGAGTTTATTTTGATGGCTGCTTTATCAGAGCTGAGAACTACAGCTTCTTTCAAGAAACTACCACGTCTGATGATTTATGGAGATGCAGCGACAGCATAGACGAGAGGCCACAATTCAAGTTAACGGTATCAAAAGCGATCGACGAGGTGATAAGAAAAGCAGTTGAGTTAGGAGGATTTGCCTTACAAGAAGAGGAAATGGTAGATGTATCAGTATATGCAATGGCCGACTGTTGGAAAACGTTGGACCGTGATAGATGTGCAGCCTGTCTTGCAAGGGCAGCTCAAGTTTCAAACTCTTGCCTGCCGTCGACCGAGGGTCGTGCTCTCAATTCTGGCTGTGTTTTGCGTTACTCTGATTACAAATTTGCTAACGAAATGAACGATGAATCAACCAAAGAATCCTTTGTTTTATATGTATCGTATTTTCTGGCTGCAACTGCCATCTGCTCTTCAATGGTTATAATGGGATTCTTCGTGGGAAAGATCGTCTACAAAAGAAAGAATTGCCGGAGAAAAAGAGATGGAGAGGATATGGATTACTCAGTATTACTCGAGAACTTGCATTTCAAATATGAAATATTAGAGAAAGCAACCGAAGGGTTTAGTGAGGGTAACAAGCTTGGTCAAGGAGGATATGGTGAAGTTTTTAAGGGAACGTTGCCAGATGGTAGAGAGATTGCAATAAAACGATTATTTATGAATGGGAAGGGTCGAGCAGAGGTTGTCTACAACGAAATTGATGTCATTAGCAGAGCTCAACACAAGAACTTGCTTCGTTTTCTTGGATGTTGCCTCGCCAGTCAAGAACAGCTTTCTTGTTTATGA 1170 44.36 MEASLSPFFVFFFFSAVSLLIQAFADSRADLVARSCRHNHALHPTSYSKCYFRMVRDLEKELEHDKFALGVAGEPPQRLYFYAQCNEDLSSEDCRQCFDVIKKMLPSCFPATGGRVYFDGCFIRAENYSFFQETTTSDDLWRCSDSIDERPQFKLTVSKAIDEVIRKAVELGGFALQEEEMVDVSVYAMADCWKTLDRDRCAACLARAAQVSNSCLPSTEGRALNSGCVLRYSDYKFANEMNDESTKESFVLYVSYFLAATAICSSMVIMGFFVGKIVYKRKNCRRKRDGEDMDYSVLLENLHFKYEILEKATEGFSEGNKLGQGGYGEVFKGTLPDGREIAIKRLFMNGKGRAEVVYNEIDVISRAQHKNLLRFLGCCLASQEQLSCL 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39741485 39743211 + Bda000498.1 Bda13g01627 19758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01627 389 ProSiteProfiles Gnk2-homologous domain profile. 135 237 IPR002902 -
Bda13g01627 389 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Bda13g01627 389 Gene3D - 27 130 IPR038408 -
Bda13g01627 389 Gene3D - 141 237 IPR038408 -
Bda13g01627 389 ProSiteProfiles Gnk2-homologous domain profile. 29 130 IPR002902 -
Bda13g01627 389 Pfam Salt stress response/antifungal 151 235 IPR002902 -
Bda13g01627 389 Pfam Salt stress response/antifungal 44 128 IPR002902 -
Bda13g01627 389 Gene3D Phosphorylase Kinase; domain 1 278 388 - -
Bda13g01627 389 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 16 385 - -
Bda13g01627 389 ProSiteProfiles Protein kinase domain profile. 316 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01627 389 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 43-RELATED 16 385 - -
Bda13g01627 389 SUPERFAMILY Protein kinase-like (PK-like) 300 384 IPR011009 -
Bda13g01627 389 Pfam Protein kinase domain 317 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01289 Bda13g01627 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01627 Bda-Chr13:39741485 Bda01g02213 Bda-Chr1:57988957 1.43E-77 dispersed
Bda01g01289 Bda-Chr1:48337235 Bda13g01627 Bda-Chr13:39741485 2.06E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70025 PF01657 Stress-antifung 6.40E-10 No_clan Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01627 - - zju:107431371 399.053