Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01631 ATGGAATCGCTCGTTGAAGGCGTGAGTTCTTTCCCGAAAGGCGAGAATTCGACGGCTTTAAGACATCTGAAACAATCAAAATATGAAGCAGCTTCTTCAACATCTAACATGGCTTCTCACAGTAATGGCAAGGCAACTAGGCAAGTAAATGGTTCTGCAGTTAGTCGAAAGCATCCTCATAATGTGGCTCTTGAAAATTTACAGCTCGAAGAATTCTCAAGTATGGCTAAACACAAGACAGAGGGAAAATTTGAATGTGTTTGTTCGAATGAAGCTTCTTCCCAAAAGACGATTTCTATGGCTGGAGCAAAACACGATCATTACAATCTTACTTTCGGTCGATCTAAAGATGGAGTGATCTCTGTTCCGAGCCCTCAAAATAGTTTATATTCTGCAACATTATACGCGGAAGCCAAACAGAGTTTCTCCAATACAGAAGTCAGCGAAGGAACGTGTAGTATCGAAAAGTCGGGGGAGAGCTGTGAAGTTTCTAATTCTTGTGATTTTAACAAGAACTGGAAAACAGGCATTTACAGAGGCAGCACAGGCAGTGATGTAAGCGATGAGAGCAACGTAAGTGGCTTTAGTAGTGCTATGTATAAACCCCACAAAGCCAATGATTCGAGATGGGAGGCAATTCAAGTCGTTCGATCTCGAGAAGGGTTACTAGGACCTAACCAATTCAGATTACTGAAGACGTTAGGCCGTGGAGATATAGGCAGTGTTTATCTTTCTGAGTTAACTGGTACGAGAACTTATTTTGCGATGAAGTTGATGAACAAAGCTGATCTGGCGAGCCGAAAGAAGCTTTTGAGAGCTCAAACGGAAAGAGAAATACTACAAGCTCTAGATCATCCGTTTCTGCCGACTCTTTATACGCATTTTGAGACGGAGAAATTCTCTTGTTTGTTAATGGAGTTTTGCCCAGGAGGAGACTTGCACCACCTCCGGCAAAGACGACCCGGCAAGTATTTCCCCGAGCATGCTGCCAGGTTTTATGTGGCCGAGGTGCTCCTTGCTTTGGAGTATCTGCATATGCTAGGAATTATCTACAGAGACCTCAAACCAGAGAATGTTTTGGTGAGGGAAGATGGGCATATAATGCTATCAGATTTTGATCTCTCTTTAAGATGTGTAGTCTCTCCAACTCTGGTTAAATCGACAAACTCGAGCTTAGAGTCCAAGAACTCTGCATTTTGCATTCGGCCTGCGTGTATCCAGCCGACGTGTGCAATGCAGCCCGATTGCATCCAACCGTCCTGTTTCTCCCCTCGCTTTTTATCGAGCAGGTCTAAGAAACCAAAGAAGGCGAAGCAAAAGAACGAAATATCTCATCAAGTGAGTCCTCTCCCCGAGCTCATTGCCGAACCCACCGGTGCTCGGTCCATGTCGTTTGTCGGTACCCACGAGTACTTGGCTCCCGAAATAATCAAAGGGGAAGGCCATGGAAGTGCTGTCGATTGGTGGACTTTTGGGATTTTTCTCTATGAGCTTCTCTTCGGCGAAACTCCGTTCAAAGGGCCAGGAAATCGAGCCACTCTTTTTAATGTTGTTGGGCAGCCGTTGAGATTTCCCGAGTCTCCTACGGTGAGTTTTGCGGCAAGGGACTTGATCAGAGGCTTGCTCGTTAAAGAGCCACAGCACCGTCTTGCTTATAGACGGGGGGCGACTGAGATTAAACAGCATCCTTTTTTCCAGAGCGTTAATTGGGCTCTGATTCGGTGTGAAACTCCGCCCGAAGTGCCAAGGACAGAGATTCCAGAAGTACCCATTGCCGAGAAGGTGCCTGGATTCGACATAAAGGCTTCAGGTAATTATTTAGATATCGATTTCTTTTGA 1839 45.35 MESLVEGVSSFPKGENSTALRHLKQSKYEAASSTSNMASHSNGKATRQVNGSAVSRKHPHNVALENLQLEEFSSMAKHKTEGKFECVCSNEASSQKTISMAGAKHDHYNLTFGRSKDGVISVPSPQNSLYSATLYAEAKQSFSNTEVSEGTCSIEKSGESCEVSNSCDFNKNWKTGIYRGSTGSDVSDESNVSGFSSAMYKPHKANDSRWEAIQVVRSREGLLGPNQFRLLKTLGRGDIGSVYLSELTGTRTYFAMKLMNKADLASRKKLLRAQTEREILQALDHPFLPTLYTHFETEKFSCLLMEFCPGGDLHHLRQRRPGKYFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLVKSTNSSLESKNSAFCIRPACIQPTCAMQPDCIQPSCFSPRFLSSRSKKPKKAKQKNEISHQVSPLPELIAEPTGARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGETPFKGPGNRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCETPPEVPRTEIPEVPIAEKVPGFDIKASGNYLDIDFF 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39798999 39800997 + Bda000503.1 Bda13g01631 19762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01631 612 SUPERFAMILY Protein kinase-like (PK-like) 202 585 IPR011009 -
Bda13g01631 612 Gene3D Transferase(Phosphotransferase) domain 1 461 583 - -
Bda13g01631 612 MobiDBLite consensus disorder prediction 25 55 - -
Bda13g01631 612 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 47 612 - -
Bda13g01631 612 PANTHER FLIPPASE KINASE 1-RELATED 47 612 - -
Bda13g01631 612 Pfam Protein kinase domain 462 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01631 612 Pfam Protein kinase domain 229 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01631 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Bda13g01631 612 Gene3D Phosphorylase Kinase; domain 1 226 311 - -
Bda13g01631 612 MobiDBLite consensus disorder prediction 25 56 - -
Bda13g01631 612 Gene3D Transferase(Phosphotransferase) domain 1 312 379 - -
Bda13g01631 612 ProSiteProfiles Protein kinase domain profile. 228 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01631 612 CDD STKc_phototropin_like 227 583 - -
Bda13g01631 612 SMART serkin_6 228 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00678 Bda-Chr5:55076302 Bda13g01631 Bda-Chr13:39798999 0 dispersed
Bda12g00974 Bda-Chr12:40896033 Bda13g01631 Bda-Chr13:39798999 0 dispersed
Bda13g00144 Bda-Chr13:1914433 Bda13g01631 Bda-Chr13:39798999 0 dispersed
Bda13g01631 Bda-Chr13:39798999 Bda01g00389 Bda-Chr1:29931717 2.84E-180 dispersed
Bda01g01294 Bda-Chr1:48416010 Bda13g01631 Bda-Chr13:39798999 2.45E-93 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70026 PF00069 Pkinase 2.30E-36 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01631 K08286 - csv:101219962 871.307