Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01648 ATGGCTGGGGGAATGATGTGGCAGTTACTGAGGAGGAAACTTCATTCGCACCATTCTGCCTCTCCATATTTTTCATCCCTTGTCTCTAAGAAAGATGATCTTGGATCTGGTGGTATGAAGTCTCTTAGAGCTCTTGCACTCGTGGGAGCTGGTGTTTCTGGGCTCTTGAGTTTCTCAACAATAGCATCTGCGGATGAAGCCGAACATGGCTTGGCATGTCCAAGCTATCCCTGGCCTCACAAGGGTATTCTGAGTTCATATGATCACATCCGTCGTGGCCATCAAGTTTACCAACAAGTCTGCGCATCATGTCATTCTATGTCTTTAATATCATACCGTGATTTGGTCGGTGTTGCATACACAGAAGAGGAGACAAAAGCAATGGCTGCTGAGATTGAGGTTGTTGATGGGCCTAATGATGAGGGTGAGATGTTCACTCGTCCTGGAAAACTCAGTGATCGGTTTCCTCAACCATATTCCAATGAACAAGCTGCTAGGTTTGCTAATGGAGGGGCATATCCTCCTGATTTAAGTCTCATAACAAAAGCTCGACACAATGGACAGAACTATGTCTTTGCCCTTCTAACTGGTTACCGTGATCCTCCTGCTGGTGTTTCGATACGAGAGGGTTTGCACTATAATCCTTATTTTCCTGGGGGTGCTATTGCAATGCCTAAAATGCTTAACGATGGGGCTGTTGAGTATGAGGATGGTACTCCTGCAACAGAAGCTCAGATGGGAAAAGATGTCGTGACGTTCTTGTCATGGGCTGCAGAACCCGAAATGGAAGAGAGGAAACTGATGGGATTCAAATGGATATTTGTTCTCTCGCTTGCTTTACTTCAGGCAGCCTATTACCGACGCCTGAAGTGGTCAGTTCTCAAGTCTCGCAAGCTAGTTCTTGACGTGGTGAACTAG 918 46.19 MAGGMMWQLLRRKLHSHHSASPYFSSLVSKKDDLGSGGMKSLRALALVGAGVSGLLSFSTIASADEAEHGLACPSYPWPHKGILSSYDHIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVVN 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39949915 39952265 - Bda000521.1 Bda13g01648 19779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01648 305 Gene3D - 261 304 - -
Bda13g01648 305 Pfam Cytochrome C1 family 78 292 IPR002326 GO:0009055|GO:0020037
Bda13g01648 305 Gene3D - 67 260 IPR036909 GO:0009055|GO:0020037
Bda13g01648 305 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 23 305 - -
Bda13g01648 305 PANTHER CYTOCHROME C1 23 305 IPR002326 GO:0009055|GO:0020037
Bda13g01648 305 PRINTS Cytochrome C1 signature 94 113 IPR002326 GO:0009055|GO:0020037
Bda13g01648 305 PRINTS Cytochrome C1 signature 221 240 IPR002326 GO:0009055|GO:0020037
Bda13g01648 305 PRINTS Cytochrome C1 signature 241 260 IPR002326 GO:0009055|GO:0020037
Bda13g01648 305 PRINTS Cytochrome C1 signature 260 275 IPR002326 GO:0009055|GO:0020037
Bda13g01648 305 PRINTS Cytochrome C1 signature 139 159 IPR002326 GO:0009055|GO:0020037
Bda13g01648 305 PRINTS Cytochrome C1 signature 210 221 IPR002326 GO:0009055|GO:0020037
Bda13g01648 305 PRINTS Cytochrome C1 signature 172 196 IPR002326 GO:0009055|GO:0020037
Bda13g01648 305 SUPERFAMILY Cytochrome c 71 259 IPR036909 GO:0009055|GO:0020037
Bda13g01648 305 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 260 304 IPR021157 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01310 Bda13g01648 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01310 Bda-Chr1:48535661 Bda13g01648 Bda-Chr13:39949915 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01648 K00413 - jre:108984043 545.814