Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01658 ATGAAAGAGAAGAGTGAGAGTGGGGGTGGGTATGTGAGGGCAGATCAGATAGATCTGAAAAGCTTGGATGAGCAATTGCAGAGGCATCTCAACCGAGCATGGACCATGGAGAAGATCAAAAAAGAGGAAGATGAAGAAGGCGGAGCGAGGCCTACGATCACCAGGCAAGAGTGGGAGATTGACCCGTCTAAGCTCATTATCAAGGGCGTTATAGCTCGTGGCACTTTTGGAACAGTTCATCGTGGAATTTACGATGGTCTTGACGTTGCTGTAAAAATGCTTGATTGGGGGGAAGAGGGTCATAGGTCGGATGCTGAATTAGCTGCTCTTAGAGCAGCTTTTACCCAAGAAGTTGCTGTGTGGCATAAGCTTGAACATCCTAATGTGACAAAGTTCGTTGGTGCGACAATGGGGACATCAGAGTTGCGCATACAAACAGATAACGGCCGAATTGGCATGCCGAGCAGCATGTGTTGTGTTGTTGTCGAATACTGTCCTGGAGGTGCATTGAAAACATATCTCATAAAGAACCGCAGAAAAAAATTGGCTTTTAAAGTAGTTGTTCATCTGGCTTTGGACCTGGCAAGAGGATTGAGCTATCTTCATTCAAAGAAGATCGTCCACAGAGATGTTAAAACAGAAAACATGCTCCTCGACAAAACACGCACAGTAAAAATTGCAGACTTTGGCGTTGCTCGTGTTGAGGCATCTAATCCAAACGACATGACTGGTGAAACAGGAACCCTGGGCTATATGGCTCCAGAGGTTCTAAATGGCAATCCATACAATAGGAAATGTGATGTGTACAGTTTTGGAATATGCTTGTGGGAGATATACTGTTGTGACATGCCTTATCCCGATCTTAGCTTCTCGGAAGTGACTTCAGCCGTTGTCCGCCAGAATCTGAGGCCCGAGATTCCTCGATGTTGCCCGAGCTCTCTTGCAAATGTCATGAAGCGATGCTGGGACGCTAACCCAGATAAGCGGCCGGAGATGGATGAGGCAGTGGCGATGTTGGAAGCCATTGATACGAGTAAAGGTGGAGGTATGATTCCTCTTGATCAACAGCAAGGTTGTTTATGTTTTAGCCGGCATCGAGGGCCTTGA 1107 46.7 MKEKSESGGGYVRADQIDLKSLDEQLQRHLNRAWTMEKIKKEEDEEGGARPTITRQEWEIDPSKLIIKGVIARGTFGTVHRGIYDGLDVAVKMLDWGEEGHRSDAELAALRAAFTQEVAVWHKLEHPNVTKFVGATMGTSELRIQTDNGRIGMPSSMCCVVVEYCPGGALKTYLIKNRRKKLAFKVVVHLALDLARGLSYLHSKKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEAVAMLEAIDTSKGGGMIPLDQQQGCLCFSRHRGP 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 40027030 40029951 + Bda000530.1 Bda13g01658 19789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01658 368 Pfam Protein tyrosine and serine/threonine kinase 68 338 IPR001245 GO:0004672|GO:0006468
Bda13g01658 368 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 362 - -
Bda13g01658 368 Gene3D Transferase(Phosphotransferase) domain 1 165 357 - -
Bda13g01658 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Bda13g01658 368 Gene3D Phosphorylase Kinase; domain 1 52 148 - -
Bda13g01658 368 PRINTS Tyrosine kinase catalytic domain signature 266 288 IPR001245 GO:0004672|GO:0006468
Bda13g01658 368 PRINTS Tyrosine kinase catalytic domain signature 310 332 IPR001245 GO:0004672|GO:0006468
Bda13g01658 368 PRINTS Tyrosine kinase catalytic domain signature 200 218 IPR001245 GO:0004672|GO:0006468
Bda13g01658 368 PRINTS Tyrosine kinase catalytic domain signature 162 175 IPR001245 GO:0004672|GO:0006468
Bda13g01658 368 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 362 - -
Bda13g01658 368 CDD STKc_MAP3K-like 71 339 - -
Bda13g01658 368 SMART serkin_6 65 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01658 368 SUPERFAMILY Protein kinase-like (PK-like) 49 339 IPR011009 -
Bda13g01658 368 ProSiteProfiles Protein kinase domain profile. 65 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01271 Bda13g01658 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00589 Bda-Chr6:8123710 Bda13g01658 Bda-Chr13:40027030 8.49E-40 dispersed
Bda09g00796 Bda-Chr9:15116171 Bda13g01658 Bda-Chr13:40027030 9.79E-46 dispersed
Bda13g01658 Bda-Chr13:40027030 Bda09g01013 Bda-Chr9:40133049 3.72E-73 dispersed
Bda04g00544 Bda-Chr4:54136935 Bda13g01658 Bda-Chr13:40027030 0 transposed
Bda13g00107 Bda-Chr13:1484747 Bda13g01658 Bda-Chr13:40027030 1.55E-126 transposed
Bda01g01271 Bda-Chr1:48131650 Bda13g01658 Bda-Chr13:40027030 1.75E-136 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70027 PF07714 PK_Tyr_Ser-Thr 4.40E-64 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01658 - - csv:101212631 686.026