Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01662 CTCTGCTCGATAGCTATGGGGGGGTTGCTGTGCATTCTTCTCACATTCCTGTTGAGCTTGAATGCCATGGCTACTGCTACTCTCAGCGCCAACTACTACGACAAATCATGCCCTAGATTCAACCAAATCGTACAGGAAACTATTACCAGTAAGCAGATCACAAATCCAACCACCGCCGCCGGAACTCTTCGTCTTCTCTTCCACGATTGCTTCCCGAACGGTTGCGATGCTTCCGTTCTCATCTCCTCCACCGCCTTCAACTCCGCCGAGCGCGACGCCGACATCAACCTCTCTCTCCCTGGAGACGCCTTCGACGTCATTGTTCGCGCAAAGACTGCTCTCGAGCTCGCCTGTCCTAACACCGTGTCCTGTGCTGACATTTTGTCCGTCGCCGCTAGGGACCTCGTCACCATGGTCGGAGGTCCGTACTACAATGTCCTACTTGGTCGCAAAGATGCGGTTGTATCTAAAGCTTCATCAATCGGAAGCAACATTCCGACGCCTTCAATGTCTATTTCTCAAATCATCAAAATTTTCAGCGATCGAGGTTTCTCTGTTCAAGAAATGGTGGCACTGTGCGGCGCCCATACAATTGGATTCTCCCATTGCAAGGAATTCAGCTCTGGGATCTACAATTACAGCAAATTTTCCCCATACGATCAGAGCAAGTTCTTTGAGGCATTTGCTCGTGCTATTGAGAAGCTCAACGTCTATGGCGTCAAAACAGGAAATCAAGGAGAGATCAGGCACAGGTGCGATGCCTTCAATTGA 771 50.06 LCSIAMGGLLCILLTFLLSLNAMATATLSANYYDKSCPRFNQIVQETITSKQITNPTTAAGTLRLLFHDCFPNGCDASVLISSTAFNSAERDADINLSLPGDAFDVIVRAKTALELACPNTVSCADILSVAARDLVTMVGGPYYNVLLGRKDAVVSKASSIGSNIPTPSMSISQIIKIFSDRGFSVQEMVALCGAHTIGFSHCKEFSSGIYNYSKFSPYDQSKFFEAFARAIEKLNVYGVKTGNQGEIRHRCDAFN 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 40069237 40070228 + Bda000534.1 Bda13g01662 19793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01662 256 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Bda13g01662 256 SUPERFAMILY Heme-dependent peroxidases 28 256 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 Gene3D - 236 256 - -
Bda13g01662 256 Gene3D - 31 165 - -
Bda13g01662 256 PANTHER - 10 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 PANTHER - 220 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 Gene3D Peroxidase, domain 2 166 219 - -
Bda13g01662 256 Gene3D Peroxidase, domain 2 220 235 - -
Bda13g01662 256 Pfam Peroxidase 47 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda13g01662 256 CDD secretory_peroxidase 28 255 IPR033905 GO:0004601|GO:0042744
Bda13g01662 256 PANTHER PEROXIDASE 31 10 214 - -
Bda13g01662 256 PANTHER PEROXIDASE 31 220 256 - -
Bda13g01662 256 ProSiteProfiles Plant heme peroxidase family profile. 27 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01662 Bda-Chr13:40069237 Bda15g00454 Bda-Chr15:7669947 1.50E-97 dispersed
Bda13g01662 Bda-Chr13:40069237 Bda01g01717 Bda-Chr1:53256820 7.94E-56 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01662 K00430 - jre:108992831 320.472