Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01671 ATGACTAAGTGTAGTTCCTTTATGATGATCTGGGTAGCTGGCATTTTTTTCTTCTCTGCTTCTTCTCTGGGAATTGCACATGACGACGTTAGGTGTCTACAAGGAGTTAAAAGCTCGCTAAGCGATCCACGACGATGGCTACGCTCATGGAATTTCGATGGCCCGTACGTGGGTTTTATTTGCACTTTTGTTGGCGTTTCGTGCTGGAACAACATCGAGAATCGCATAATCGACTTGCAGCTCAGAAACATGGAACTTTCTGGTCCGATTCCCGAATCTTTGCAGTACTGTGGAAGTCTTCAAGTCTTGGATCTTTCTCATAATAATCTTTCTGGTCCGATCCCTTTTGAGCTATGTGATTGGTTGCCCTTTTTGGTTAGATTAGATCTGTCCAATAATCAATTTTCAGGTCATATTCCCGTTGACCTTGCGAAATGTTTGTATCTGAATCATCTGATCCTTTCGAACAATCAGTTTTTGGGTAGTGTTCCTCATGAATTTTCTACTTTGGATCGGCTTAAGAAGTTTTCTGTAAGAAATAACCACCTTACAGGTATCATCCCTTCTTTTTTTGATGGATTTGATGCGTTTGATTTTGATGGAAATAGTGGCCTGTGTGGAGGGCCTCTTGAATTAAAGTGTAGTGTGGTTAAGAAGAAAAATGTTATTGCCATAATTGTTGCTGGGCTCTTTGGTTCCTCGTCATTGTCTTTGGGTGTTGGGTTGTGGTTTTGTTTGAGGTTCAGAAGAAGAAACAAAAGGATACACAGGTTGGGAAAGATTGTGTCTGGCGTTGGCCTCAAATTTTAA 810 41.11 MTKCSSFMMIWVAGIFFFSASSLGIAHDDVRCLQGVKSSLSDPRRWLRSWNFDGPYVGFICTFVGVSCWNNIENRIIDLQLRNMELSGPIPESLQYCGSLQVLDLSHNNLSGPIPFELCDWLPFLVRLDLSNNQFSGHIPVDLAKCLYLNHLILSNNQFLGSVPHEFSTLDRLKKFSVRNNHLTGIIPSFFDGFDAFDFDGNSGLCGGPLELKCSVVKKKNVIAIIVAGLFGSSSLSLGVGLWFCLRFRRRNKRIHRLGKIVSGVGLKF 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 40122722 40123531 + Bda000543.1 Bda13g01671 19802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01671 269 PRINTS Leucine-rich repeat signature 122 135 - -
Bda13g01671 269 PRINTS Leucine-rich repeat signature 100 113 - -
Bda13g01671 269 ProSiteProfiles Leucine-rich repeat profile. 99 120 IPR001611 GO:0005515
Bda13g01671 269 Pfam Leucine Rich Repeat 99 115 IPR001611 GO:0005515
Bda13g01671 269 Gene3D Ribonuclease Inhibitor 26 216 IPR032675 -
Bda13g01671 269 SUPERFAMILY L domain-like 28 202 - -
Bda13g01671 269 PANTHER - 7 255 - -
Bda13g01671 269 Pfam Leucine rich repeat N-terminal domain 27 69 IPR013210 -
Bda13g01671 269 PANTHER OS07G0107800 PROTEIN-RELATED 7 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01671 Bda-Chr13:40122722 Bda12g00542 Bda-Chr12:8656617 9.78E-91 dispersed
Bda13g01671 Bda-Chr13:40122722 Bda10g00019 Bda-Chr10:362175 1.21E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01671 - - cit:102611300 290.426