Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g01680 | ATGGAAACGGCAATACTGAAAAATGAAGAGAACCCGGGGAAAAGACGCCAATTTTGGTTGCCGGAAAATGAGACCGACTCTCTGAGATGTGTCAAAAGACGGCGAAGAAGCCGAGTGGCCAGTGCAGCTCCGGTTGGTTGTGGTGAGAGCCAGAATCAAAGTCAGAGTCAGAAGCAGCAAGTTGATCAAATTCCAGCTGCCACCACAACCAAGAGAAGTTCAAGATTTCGAGGAGTAAGCAGACATCGATGGACTGGTCGATACGAAGCTCATTTGTGGGATAAGCTGTCATGGAATATTACACAGAAAAAGAAGGGGAAACAAGGAGCTTATGATGACGAAGAATCAGCAGCAAGAGCATATGATTTAGCCGCACTGAAATACTGGGGGACGTCTACTTTCACCAATTTTCCTGTATCAGAATACGAAAGCGAGGTAAAAATTATGCAGCCATTGACAAAAGAGGAGTATCTTGCCTCTTTAAGAAGGAAGAGCAGTGGATTCTCGAGAGGTGTATCGAAGTACAGGGGAGTTGCAAGGCATCATCATAATGGTAGATGGGAAGCTAGAATAGGAAGAGTTTTTGGAAATAAATATCTCTATCTTGGCACTTACAGTACCCAAGAGGAAGCTGCTCGTGCCTATGACATAGCAGCGATTGAGTACAGAGGAAACAATGCCATCACAAATTTCGACCTGAGTTCATATATGAGATGGTTAAAGCCAGAATCAGACAGCGAAAATGCAGAATATGAAGCACAAATGGGGATATTTTGCTTGCCACCATCAGGGGTTATTCCACTTCATAATCATCCTGCCATGACTGTTTTCAGCAAGCTTCTTTTCGGAACTATGCACATTAAATCTTATGATTGGGTGGTCGATGCTACTCGAGGTGATTCGACATCGAGCAGGAATCCACCAATGCCCCCGGACGGAGTCCGATTGTCCAAAGTCAAGGTCGACTCGGATTTTACAGCCCCTTGCAATGCATCCATCCTTTATCCAGCCGACGGAGGCAACATGCATTGCTTCACAGCCATCACAGCTTGTGCTGTTTTAGACGTGCTTGGCCCCCCATACTCTGATCCCGACGGCCGTCACTGCACGTACTATCGAGATCTTCCCTTCGCCACCTTTGCAGTTGAGGGGGTTGCAGTGGGAGAGGAGGATGAAGAGAAGTATGCTTGGCTTCAAGAGAGAGAGACGGTCCAGGAGTTAGCAGTAGTCGGAGCGCCGTACAGAGGCCCGAAAATTGTGAAGAGTTCATTCGATTACCAATAG | 1284 | 46.73 | METAILKNEENPGKRRQFWLPENETDSLRCVKRRRRSRVASAAPVGCGESQNQSQSQKQQVDQIPAATTTKRSSRFRGVSRHRWTGRYEAHLWDKLSWNITQKKKGKQGAYDDEESAARAYDLAALKYWGTSTFTNFPVSEYESEVKIMQPLTKEEYLASLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGNNAITNFDLSSYMRWLKPESDSENAEYEAQMGIFCLPPSGVIPLHNHPAMTVFSKLLFGTMHIKSYDWVVDATRGDSTSSRNPPMPPDGVRLSKVKVDSDFTAPCNASILYPADGGNMHCFTAITACAVLDVLGPPYSDPDGRHCTYYRDLPFATFAVEGVAVGEEDEEKYAWLQERETVQELAVVGAPYRGPKIVKSSFDYQ | 427 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 40175782 | 40181792 | + | Bda000552.3 | Bda13g01680 | 19811 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g01680 | 427 | CDD | cupin_ADO | 255 | 362 | - | - | |
Bda13g01680 | 427 | SUPERFAMILY | RmlC-like cupins | 252 | 379 | IPR011051 | - | |
Bda13g01680 | 427 | Pfam | AP2 domain | 173 | 224 | IPR001471 | GO:0003700|GO:0006355 | |
Bda13g01680 | 427 | Pfam | AP2 domain | 74 | 130 | IPR001471 | GO:0003700|GO:0006355 | |
Bda13g01680 | 427 | Gene3D | AP2/ERF domain | 173 | 229 | IPR036955 | GO:0003700|GO:0006355 | |
Bda13g01680 | 427 | Gene3D | AP2/ERF domain | 74 | 140 | IPR036955 | GO:0003700|GO:0006355 | |
Bda13g01680 | 427 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 9 | 254 | - | - | |
Bda13g01680 | 427 | SMART | rav1_2 | 75 | 144 | IPR001471 | GO:0003700|GO:0006355 | |
Bda13g01680 | 427 | SMART | rav1_2 | 174 | 238 | IPR001471 | GO:0003700|GO:0006355 | |
Bda13g01680 | 427 | PRINTS | Ethylene responsive element binding protein signature | 214 | 234 | IPR001471 | GO:0003700|GO:0006355 | |
Bda13g01680 | 427 | PRINTS | Ethylene responsive element binding protein signature | 76 | 87 | IPR001471 | GO:0003700|GO:0006355 | |
Bda13g01680 | 427 | CDD | AP2 | 74 | 140 | IPR001471 | GO:0003700|GO:0006355 | |
Bda13g01680 | 427 | MobiDBLite | consensus disorder prediction | 1 | 77 | - | - | |
Bda13g01680 | 427 | ProSiteProfiles | AP2/ERF domain profile. | 174 | 232 | IPR001471 | GO:0003700|GO:0006355 | |
Bda13g01680 | 427 | SUPERFAMILY | DNA-binding domain | 173 | 234 | IPR016177 | GO:0003677 | |
Bda13g01680 | 427 | MobiDBLite | consensus disorder prediction | 7 | 31 | - | - | |
Bda13g01680 | 427 | CDD | AP2 | 173 | 234 | IPR001471 | GO:0003700|GO:0006355 | |
Bda13g01680 | 427 | SUPERFAMILY | DNA-binding domain | 74 | 140 | IPR016177 | GO:0003677 | |
Bda13g01680 | 427 | MobiDBLite | consensus disorder prediction | 46 | 74 | - | - | |
Bda13g01680 | 427 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 9 | 254 | - | - | |
Bda13g01680 | 427 | ProSiteProfiles | AP2/ERF domain profile. | 75 | 138 | IPR001471 | GO:0003700|GO:0006355 | |
Bda13g01680 | 427 | Gene3D | Jelly Rolls | 230 | 374 | IPR014710 | - | |
Bda13g01680 | 427 | Pfam | PCO_ADO | 254 | 419 | IPR012864 | GO:0016702 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01244 | Bda13g01680 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda10g00018 | Bda-Chr10:354206 | Bda13g01680 | Bda-Chr13:40175782 | 7.04E-07 | dispersed | |
Bda13g00676 | Bda-Chr13:7695782 | Bda13g01680 | Bda-Chr13:40175782 | 7.42E-41 | dispersed | |
Bda13g01680 | Bda-Chr13:40175782 | Bda03g00160 | Bda-Chr3:1319585 | 2.70E-06 | dispersed | |
Bda01g02255 | Bda-Chr1:58302655 | Bda13g01680 | Bda-Chr13:40175782 | 7.38E-08 | transposed | |
Bda01g02282 | Bda-Chr1:59204511 | Bda13g01680 | Bda-Chr13:40175782 | 9.73E-09 | transposed | |
Bda03g01557 | Bda-Chr3:54748972 | Bda13g01680 | Bda-Chr13:40175782 | 4.33E-07 | transposed | |
Bda10g00763 | Bda-Chr10:42073745 | Bda13g01680 | Bda-Chr13:40175782 | 1.91E-07 | transposed | |
Bda01g01244 | Bda-Chr1:47834947 | Bda13g01680 | Bda-Chr13:40175782 | 5.16E-96 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16954 | PF07847 | PCO_ADO | 7.70E-60 | CL0029 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g01680 | - | - | rcu:8276029 | 372.474 |