Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g01690 | ATGGAAGTAGCTCCGACTCCGATTGCCACCATTAACAGCGGGGTTAAATCTCCGGAAGCTGATTCTGAAACCCCGACGAAGATCCAGCCGGGTGGAAAGCTTTCACCTTTTAGTAATGGCGTCCTCAAGCGTCACGGTTTTGCGGCTTCTCCTGTTTCTTACAAAGAATGTCTGAAAAATCACGCTGCTAGCATCGGTTCTCACGCTTTGGATGGGTGTGGAGAGTTTATGCCCTCTCCTTCCGCCGCTTCTAATGACCCTTTTTCTCTCAAATGCGCAGCCTGCGGTTGTCACCGGAACTTCCACCGCCGTGAGCCGGAAGATCAGCCACTTTCTGGTGCCATTTCCACGCATGTAATCGAATATCAGCCGCACCACCGCCATCACCCACCTCCGCCGCTACATCCGACCTCCAACCGTAGCCCGAATTCTTCCTCGCCACCGCCAATCTCCTCCTCTTACTACCCCTCAGCCCCACACATGCTTCTCGCTCTGTCGGCCGGACTGTCGGCTCATCCCGAAATTGCACCGGCAATGGTCTCTCCGACGACCGCAAGAAAACGGTTCAGAACAAAATTCAGCACAGATCAGAAAGAGAAGATGCACGAGTTTGCAGAAAAACTGGGGTGGAAATTTCAGAAGAGAGACGAAGACCTGGTTCGAGAATTCTGCAGCGAAGTCGGAGTAGAGAAAGGAGTTCTCAAAGTCTGGATGCATAACAACAAGAACGCTTTTGCTACTAAGAAGGACGTCAATGGCGAAAGGCCGATCTTGCAAAATTCCCTGAACAACGGCAACAACTACGAGGAAAACGCCATTAATCACCACCACTCCATGGTTCAGAATCCGAATCACTATCACAACGACGGAACGCTACATTTTGGCACTAATGGGTCGTCTTCTTCCTCTTGA | 912 | 51.1 | MEVAPTPIATINSGVKSPEADSETPTKIQPGGKLSPFSNGVLKRHGFAASPVSYKECLKNHAASIGSHALDGCGEFMPSPSAASNDPFSLKCAACGCHRNFHRREPEDQPLSGAISTHVIEYQPHHRHHPPPPLHPTSNRSPNSSSPPPISSSYYPSAPHMLLALSAGLSAHPEIAPAMVSPTTARKRFRTKFSTDQKEKMHEFAEKLGWKFQKRDEDLVREFCSEVGVEKGVLKVWMHNNKNAFATKKDVNGERPILQNSLNNGNNYEENAINHHHSMVQNPNHYHNDGTLHFGTNGSSSSS | 303 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 40265752 | 40266663 | - | Bda000562.1 | Bda13g01690 | 19821 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g01690 | 303 | MobiDBLite | consensus disorder prediction | 124 | 152 | - | - | |
Bda13g01690 | 303 | Pfam | ZF-HD protein dimerisation region | 52 | 106 | IPR006456 | - | |
Bda13g01690 | 303 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 186 | 243 | IPR006455 | - | |
Bda13g01690 | 303 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 54 | 105 | IPR006456 | - | |
Bda13g01690 | 303 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 54 | 105 | IPR006456 | - | |
Bda13g01690 | 303 | Gene3D | - | 178 | 248 | - | - | |
Bda13g01690 | 303 | MobiDBLite | consensus disorder prediction | 10 | 33 | - | - | |
Bda13g01690 | 303 | SUPERFAMILY | Homeodomain-like | 177 | 243 | IPR009057 | - | |
Bda13g01690 | 303 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 10 | 268 | - | - | |
Bda13g01690 | 303 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Bda13g01690 | 303 | PANTHER | HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN | 10 | 268 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01865 | Bda-Chr11:53736302 | Bda13g01690 | Bda-Chr13:40265752 | 2.85E-47 | dispersed | |
Bda12g00161 | Bda-Chr12:1551063 | Bda13g01690 | Bda-Chr13:40265752 | 1.14E-94 | dispersed | |
Bda13g01690 | Bda-Chr13:40265752 | Bda06g00184 | Bda-Chr6:2514767 | 2.44E-51 | dispersed | |
Bda13g01690 | Bda-Chr13:40265752 | Bda07g01353 | Bda-Chr7:16358501 | 1.38E-88 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16956 | PF04770 | ZF-HD_dimer | 1.40E-28 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g01690 | - | - | jre:108985975 | 335.495 |