Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01699 ATGGATGGATCCAGTTCACGTGGTGCCAGTACCGTGAATGCATATCTTCCCAATTACAAACTTGGGAGGACTCTTGGAATAGGTTCATTTAGTAAGGTCAAAATTGCTGAGCATGCATTGACAGGCCATAAAGTTGCTATAAAGATCCTCAATCGCCAAAAGATAAAGAACCTGGATATGGCAGAGAGAGTGAAAAGGGAAATCGAAATACTTAGATTGTTAATGCACCCTCACATAATAAGACTCTATGAGGTCATCGAGACACCAGCTGATATTTTAGTTGTGATGGAGTATGTTAAGTATGGAGAGCTCTTTGATTATATTGTGGAGAAGGGTCGATTGCAGGAAGAAGAAGCTCGAATATTTTTCCAACAGATAATATCTGGAGTAGAGTACTGCCACAGGAATAGGGTGGTTCATAGAGACCTTAAACCTGAGAATTTGCTCTTGGATTCAGAGCGCAATATAAAGATTGCCGACTTTGGGCTGAGCAATATAATGCGTGATGGTCATTTTCTGAAGACAAGTTGTGGGAGTACTAATTATGCTGCTCCAGAGGTTATTTCTGGTAAATTATATGCAGGACCTGAAGTAGATGTATGGAGCTGTGGTGTTATATTGTATGCTCTTCTATGTGGTACACTTCCATTCGACGACGAAAACATTCCCAACCTTTTTATGAAAATAAAGGGCGGGATATATACTATTCCAAGTCATTTATCTCCGGGTGCTAGAGATTTGATCCCAAGAATGCTCGAGGTCAACCCTACAAAACGAATGACCATACCTGAGATTCGCCAGCACCTCTGGTTTCATGCCCATCTGCCGCGCTATTTAGCCGTGCCTCCTCCTGATACAATGCAACAAGCAAAACAGATTGACGAAGACATTCTCCAAGAAGTGGTGAAAATGGGATTTGACAGAAACCAGCTGTTGGAATCTCTTCTCTGCAGAATCCAGAATGAGGCCACAGTCTCATATTATTTGTTGCTGGATAATAGATTCCCAGTCTCTGGCTATCTTGGAGATGAGAATCTGATTTCAGCTCATCCAAGTGGTGCCACAAATCCAGCTGTCGGACGTTGTCTTCCTGGATTTATGGATTATCAAGGGACGGGATTGAGACCACAGTATCCCTTAGAGCGTAAATGGGCGCTTGGATTGCAGTCAAAAACTCATCCTTGTGAAATAATGATGAAAGTTCTCAATGTGGGTTGGAAGAAGATTGAACATTACAATCATTACAAGACAAGGGAGGAGAAGTATCTGCATGATCTGCAGAGAGTTCAAGGGCCTATACGCAAAATGGATCTGGAAGCAAGAAGTTTGCAGCCTAATGTCAAGGCCATTCTTCTGGCTAAATTAAGGGAATACAAATCAGACCTGAACAATCTTAAAAGTGAAGTTAAACGAATTGGATCCGGTAACTCATATGCATCCGCTCGAGATGAATTATTGGAATCTGGAATGGCCGATACATTGACTGCATCAGCTGATCAAAGGTCACGATTGATGATGGCAACTGAGAGATTAAATTTTTCTGGTGACAGAATTAAGGAAAGTCGAAGAACCATGCTTGAAACAGAAGATCTCGGTGTTTCAATTCTTCAAGACTTGTATTCACAAAGGCAGTCTCTCTTGCATGCTAATAACACGCTTCATGGGGTGGATGACAACATTTGGAAGAGTAAGAAAATTTTGACCAACATCTCAAGGAGAATAAACAGAAACAAGTGGATTATTGTGTCTATTGTTGCTGTCCTCGTTATTGTCATTGCTCTAATATTGTACTTCAAACTAAAGTAA 1806 41.09 MDGSSSRGASTVNAYLPNYKLGRTLGIGSFSKVKIAEHALTGHKVAIKILNRQKIKNLDMAERVKREIEILRLLMHPHIIRLYEVIETPADILVVMEYVKYGELFDYIVEKGRLQEEEARIFFQQIISGVEYCHRNRVVHRDLKPENLLLDSERNIKIADFGLSNIMRDGHFLKTSCGSTNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFMKIKGGIYTIPSHLSPGARDLIPRMLEVNPTKRMTIPEIRQHLWFHAHLPRYLAVPPPDTMQQAKQIDEDILQEVVKMGFDRNQLLESLLCRIQNEATVSYYLLLDNRFPVSGYLGDENLISAHPSGATNPAVGRCLPGFMDYQGTGLRPQYPLERKWALGLQSKTHPCEIMMKVLNVGWKKIEHYNHYKTREEKYLHDLQRVQGPIRKMDLEARSLQPNVKAILLAKLREYKSDLNNLKSEVKRIGSGNSYASARDELLESGMADTLTASADQRSRLMMATERLNFSGDRIKESRRTMLETEDLGVSILQDLYSQRQSLLHANNTLHGVDDNIWKSKKILTNISRRINRNKWIIVSIVAVLVIVIALILYFKLK 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 40350190 40363926 - Bda000571.1 Bda13g01699 19830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01699 601 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Bda13g01699 601 SUPERFAMILY Protein kinase-like (PK-like) 16 291 IPR011009 -
Bda13g01699 601 ProSiteProfiles Protein kinase domain profile. 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01699 601 Gene3D - 414 479 IPR038407 -
Bda13g01699 601 CDD SNARE_Vti1 508 569 - -
Bda13g01699 601 Gene3D Transferase(Phosphotransferase) domain 1 9 340 - -
Bda13g01699 601 Pfam Snare region anchored in the vesicle membrane C-terminus 509 573 - -
Bda13g01699 601 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 413 - -
Bda13g01699 601 Pfam Protein kinase domain 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01699 601 SMART serkin_6 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g01699 601 Coils Coil 448 468 - -
Bda13g01699 601 Pfam Vesicle transport v-SNARE protein N-terminus 427 471 IPR007705 GO:0006886|GO:0016020
Bda13g01699 601 Gene3D - 498 578 - -
Bda13g01699 601 SUPERFAMILY SNARE fusion complex 513 570 - -
Bda13g01699 601 CDD STKc_AMPK_alpha 16 271 - -
Bda13g01699 601 CDD UBA_SnRK1_plant 293 333 - -
Bda13g01699 601 SUPERFAMILY KA1-like 365 433 IPR028375 -
Bda13g01699 601 PANTHER SERINE/THREONINE KINASE 9 413 - -
Bda13g01699 601 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 292 332 IPR015940 -
Bda13g01699 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Bda13g01699 601 SUPERFAMILY t-snare proteins 425 472 IPR010989 GO:0016020|GO:0016192
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01225 Bda13g01699 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01699 Bda-Chr13:40350190 Bda02g00137 Bda-Chr2:19715219 5.51E-87 dispersed
Bda14g00284 Bda-Chr14:1934114 Bda13g01699 Bda-Chr13:40350190 4.07E-68 dispersed
Bda01g01225 Bda-Chr1:47634475 Bda13g01699 Bda-Chr13:40350190 1.41E-103 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70028 PF00069 Pkinase 3.10E-77 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01699 K07198 - mnt:21403819 682.945