Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01701 ATGGAGGGACTGAGAAGGTCGCCGCCTGTAGGGGCGGCTGGTGCGGTGGTGGTGGTGGTGACTGTGTGTTTTTTAGGGATGATGGTGCAAGAAGTTTCAGCTACTCGGTGGATTGTTGGAAGTTACTTGGGGTGGACAACCGATGTCAACTACACTGTTTGGGCTCAAGATAAGCAGTTCTACAATGGCGATTGGCTCTTTTTTGTTTACGACCGGAATCAAAAGAACGTATTGGAGGTGAACCAAACGGACTACGAGGCATGCAACTCCGATCACCCGCTTCATAATTGGACGACGGGGCACGGGAGAGATGTGGTGCCGCTCAACGTCACAAGGGACTACTATTTCATTAGCGGCAAAGGTTTCTGCTATGGAGGTATGAAGTTGGCCGTCCAGGTGGAGAATTTGCCTCCTCCTCCGTCGTCTTTGCCGGTGGATCAAAAGAATTCAGCTCCTCCAGCTCGAACTCATAATCGGCGCCGCCTCATTATTCCGGTGGCATTGGCGGTCGGAGTCATTTGGAAAGCCTTTGTTTGGCTGTGGTAG 546 51.83 MEGLRRSPPVGAAGAVVVVVTVCFLGMMVQEVSATRWIVGSYLGWTTDVNYTVWAQDKQFYNGDWLFFVYDRNQKNVLEVNQTDYEACNSDHPLHNWTTGHGRDVVPLNVTRDYYFISGKGFCYGGMKLAVQVENLPPPPSSLPVDQKNSAPPARTHNRRRLIIPVALAVGVIWKAFVWLW 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 40376899 40377559 - Bda000573.1 Bda13g01701 19832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01701 181 PANTHER LAMIN-LIKE PROTEIN 12 172 - -
Bda13g01701 181 Pfam Plastocyanin-like domain 45 127 IPR003245 GO:0009055
Bda13g01701 181 SUPERFAMILY Cupredoxins 34 133 IPR008972 -
Bda13g01701 181 Gene3D - 33 136 IPR008972 -
Bda13g01701 181 PANTHER BLUE COPPER PROTEIN 12 172 IPR039391 GO:0009055
Bda13g01701 181 ProSiteProfiles Phytocyanin domain profile. 35 135 IPR003245 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00563 Bda-Chr12:9658879 Bda13g01701 Bda-Chr13:40376899 1.51E-28 dispersed
Bda13g01701 Bda-Chr13:40376899 Bda02g00214 Bda-Chr2:37703947 2.24E-15 dispersed
Bda01g01224 Bda-Chr1:47609870 Bda13g01701 Bda-Chr13:40376899 1.02E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01701 - - mesc:110608622 255.758