Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01704 ATGGCGACTCCGAGGCCGCAGAGATCACCGGCGGAGGTGGAGGATATAATTATTAGGAAAATTTTTCTTGTGTCTTTTACGGATACCGGCAGTTCCGATTCCCGAATCGTCTACCTTGAGCAGACTGCAGCTGAGGTCTTGAGCGAGGAGAAGGATTTGAGGCTCTCTAGGGATTTGATGGAAAGAATCATTATCGATCGACTTTCTGGTAATTTTCCTTCTGCGGAACCGCCTTTCCAATATCTAATTGGGTGCTATCGCCGTGCCTATGACGAGGGGAAGAAAATCGTGTCCATGAAGGATAAGAATTTGAGGTCTGAGATGGAATTAGTTGTGAAACAAGCAAAAAAGTTATCGGTTTCTTATTGTAGGATACATCTGGGGAATCCGGGATGGTTTGCTGATGGGAAATCAGAAGCAGACACTAAGAATGTTTCACCTCTGTTGCCCTTGGTTTTCTCTGAGGTTGGGGGTTCAGTTGATGGATTTGGAGGCAGTAATAGCAGTGGAGGATTTCAGAGCCCACCAGGTTTTTTGGAGGAGTTTTTCCGAGATTCTGATTTGGATAGCTTGGACCCTATTTTGAAGGTGCTTTTTGAAAATTTGAGAGGCACTGTGATAAAGGTTTCAGCTTTAGGGAACTTCCAGCAGCCTTTGAGAGCATTGTTATTTTTACTTAGTTTTCCACTTGCTGCTAAGTCTTTAGTGAAGCATCCATGGTGGATACCGGATAGTAAGTATCTAAATGGGCGTGTTATTGAAATGACAAGCATTTTGGGGCCTTTTTTTCATGTTAGCGCGTTGCCTGACGTTGAGATTTTTAAGAGTGAACCTAATGTTGGGCAACAATGCTTTTCTGAAGTATCAACTCGACGGCCATCTGATTTATTAGCTTCATTTACGACAATCAAAACAGTCATGAATAACTTGTATGATGGCCTAACCGAAGTTCTTCTCTCTCTTCTTAAGAATACAGACACTCGTGAACATGTTCTTGAGTATCTTGGGGTGGTGATAGTTGAGCTTCTCTCTTCTGCCAGTTCAGGGATGTTTGTCAATCTCAGTGTTGTTATGCTTAGGTTATGTGAGCCATTTTTGGATGCAAATATGACAAAACGGGATAAACTTGATCCAAATTATGTATTCTATGGTAACCGTTTAGAATTAAGAGGGTTGACTGCTCTACATGCATCGCTGGAAGAAGTTTCTGAGTGGATTAATGATGATAATAATGGGAAAACTGATAGTTCTGGACAATATAGTGATGGTGAAAATCGATTGCTTCAATCTAAAGAAGCCTCTGTTTCTGGTAATGATGTGTCTGGAGCATATAAGGGAAAGCAAAAAATTAATGAAAAAAGAAAGTTCCCGTTCATATGTGAATGCTTCTTTATGACAGCAAGGGTACTCAACTTAGGCTTGTTAAAAGCCTTGTCAGACTTCAAACATTTGGTACAGGATATATCCAGGTCTGAAGATATGCTTTCTACTCTTAAAGACAGACGGGGTTCAGCCACTTCTCAGCAGCTTGAATTGGAAATAGCTCGTCTTGAGAAGGAAATTGAGGTTTATTCGCAGGAAAAACTTTGCTATGAAGCGCAGATACTAAGGGATGGAAGTCTGATTCAGCAGGCTCTTTCTTTCTACCGACTAATGGTTGTTTGGTTAGTTGGCTTGGTCGGTGGATTCAAAATGCCCCTTTCGCCAATTGCTCCAATGGAATTTGCTTGCATGCCTGAACATTTTGTGGAAGATGCAATGGAATTGCTTATATTCGCTTCTAGGATTCCTAAAGCTTTGGATGGCTCCTTGTTGGATGAATTTATGAATTTCATCATCATGTTCATGGCAAGTCCGGACTACATCCGAAATCCTTATCTGAGAGCAAAGATGGTTGAAGTCCTTAACTGCTGGATACCTCGTGGAAGTGGCACGTCTGCTACAAATACTTTATTTGATGGACATCAACTGTCTCTTGAGTATCTTGTGAGAAATCTTTTGAAGCTTTATGTTGACATTGAGTTCACTGGTTCTCACACACAGTTCTATGACAAGTTCAACATCCGCCACAATATTGCCGAACTTCTTGAATACCTCTGGCAGGTTCCTAGTCATCGTAGTGCTTGGAGACAGATTGCTAAGGAGGAGGAAAAGGGTGTTTATTTGAATTTCCTAAACTTCCTAATCAATGATAGCATATATCTTCTCGATGAAAGCCTTAATAAAATTCTTGAAATCAAAGAGCTGGAAGCCGAGATGTCAAACACTGTGGAGTGGGAACAACGACCTGCTCAAGAAAGACTAGAGAGAACTCGGTTGTTCCAAAGCCAAGAAAATATTATTCGAATTGATATGAAATTGGCAAATGAGGATGTTGGTTTACTTTCATTTACCTCAGAGCAGATTACAGCCCCTTTTCTACTTCCTGAGATGTTTTCTTCTTTCTGTCATCCAAAACCTTTTCAGATTGAAAGAGTGGCAAGCATGCTCAATTATTTTCTCCTACAACTTGTTGGTCCTCAACATAGATCTCTTAGTCTGAAGGACCCAGAGAAGTATGAATTCCGTCCAAAGCAGCTGCTTAAGCAGATTGTGCAAATATATGTCCACCTGGCAAGGGGTGATTCAAATAATGTTTTCCCTGCTGCCATCTCCAAGGATGGTCGATCTTATAACGAGCAATTGTTCACTGCTGCAGCAGTGGTCCTTCAGAGAATAGGAGAAGATATGAGGATCATTCGAGAGTTTATTGAGCTTGGTAACAAAGCTAAAATTGCAGCTTCTGAGGCTTTAGACGCTGAAGCTGCTCTTGGAGAAATACCTGATGAGTACCTTGATCCAATTCAATATACTTTAATGAAGGATCCAGTGATCCTACCTTCTTCAAGGATCACAGTCGACCGGCCGGTCATTCAAAGACACCTACTAAGTGATAGTACTGACCCATTCAATCGTTCGCATCTCACGGCCGACATGCTCATACCGGATGTGGAATTGAAAGAGAAAATTGAGGAGTTCATTAGGTCCCAACAAATGAAGAAGCGATCAGAAGGGGTAAACGTGCAAAACACCTAA 3075 41.4 MATPRPQRSPAEVEDIIIRKIFLVSFTDTGSSDSRIVYLEQTAAEVLSEEKDLRLSRDLMERIIIDRLSGNFPSAEPPFQYLIGCYRRAYDEGKKIVSMKDKNLRSEMELVVKQAKKLSVSYCRIHLGNPGWFADGKSEADTKNVSPLLPLVFSEVGGSVDGFGGSNSSGGFQSPPGFLEEFFRDSDLDSLDPILKVLFENLRGTVIKVSALGNFQQPLRALLFLLSFPLAAKSLVKHPWWIPDSKYLNGRVIEMTSILGPFFHVSALPDVEIFKSEPNVGQQCFSEVSTRRPSDLLASFTTIKTVMNNLYDGLTEVLLSLLKNTDTREHVLEYLGVVIVELLSSASSGMFVNLSVVMLRLCEPFLDANMTKRDKLDPNYVFYGNRLELRGLTALHASLEEVSEWINDDNNGKTDSSGQYSDGENRLLQSKEASVSGNDVSGAYKGKQKINEKRKFPFICECFFMTARVLNLGLLKALSDFKHLVQDISRSEDMLSTLKDRRGSATSQQLELEIARLEKEIEVYSQEKLCYEAQILRDGSLIQQALSFYRLMVVWLVGLVGGFKMPLSPIAPMEFACMPEHFVEDAMELLIFASRIPKALDGSLLDEFMNFIIMFMASPDYIRNPYLRAKMVEVLNCWIPRGSGTSATNTLFDGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRSAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILEIKELEAEMSNTVEWEQRPAQERLERTRLFQSQENIIRIDMKLANEDVGLLSFTSEQITAPFLLPEMFSSFCHPKPFQIERVASMLNYFLLQLVGPQHRSLSLKDPEKYEFRPKQLLKQIVQIYVHLARGDSNNVFPAAISKDGRSYNEQLFTAAAVVLQRIGEDMRIIREFIELGNKAKIAASEALDAEAALGEIPDEYLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPDVELKEKIEEFIRSQQMKKRSEGVNVQNT 1024
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 40385033 40390876 - Bda000575.3 Bda13g01704 19835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01704 1024 Coils Coil 507 534 - -
Bda13g01704 1024 PANTHER - 1 1015 - -
Bda13g01704 1024 SUPERFAMILY RING/U-box 932 1011 - -
Bda13g01704 1024 Pfam U-box domain 940 1011 IPR003613 GO:0004842|GO:0016567
Bda13g01704 1024 CDD RING-Ubox_UBE4A 942 1011 - -
Bda13g01704 1024 Pfam Ubiquitin elongating factor core 259 923 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Bda13g01704 1024 ProSiteProfiles U-box domain profile. 939 1013 IPR003613 GO:0004842|GO:0016567
Bda13g01704 1024 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 939 1019 IPR013083 -
Bda13g01704 1024 PANTHER UBIQUITINATION FACTOR E4 1 1015 IPR045132 GO:0000151|GO:0030433|GO:0034450
Bda13g01704 1024 SMART Ubox_2 943 1006 IPR003613 GO:0004842|GO:0016567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01704 K10597 - csv:101211398 1551.57