Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g01705 | ATGCTTATTGGCGAACCTGGTGTTGGGAAAACTGCAATTTCTGAAGGTCTTGCTCAACGAATCGTTCAAGGCGATGTACCTCAGGCACTGATGAATAGACGGAATATTGTTTTGCTACAGCTAATTTCTCTTGACATGGGTGCTTTGATTGGAGGAGCAAAATATCAGGGAGAGTTTGAGGATAGGCTCAAGGCTGTGCTAAAGGAAGTTACTGAATCAGATGGTCAGGTCGTTCTTTTCATCGATGAGATCCACACCGTTGTTGGAGCAGGGACCCCTACAAATCTTTTGAAGCCTATGCTCGGTAGGGGGGAACTACGATGCATTGGCACAACAACGCTAGATGAGTATCGCAAATATATTGAGAAAGATCCTGCCTTGGAAAGACGTTTCCAGCAAGTTTATGTTGATCAGCCTACAGTTGAAGATACAATTTCTATTCTCCAAGGACTTCGTGAAAGATACGAGCTACATCACGGAGTTCGTATTTCAGATGGTGCCCTTGTGGAAGCTGCAATACTCTCGGATCGTTATATAAGTGGACGGTTTTTGTCTGACAAAGGTAATCATTTTCCTTTCCGTGATGAAGCAGCTGCGAAACTGAAAATGGAGATTACCTCGAAGTCGACTGCTGTTGACGAGATCAATCGAGCAGTGCTGAAGTTAGAGATGGAGAGGCTTTTGCTCACTAATGATACTGATAAAGCTTCTAAAGAAAGGTTGAATCGCCTTGACGGCGAGTTGTCTCTCTTAAAAGAGAAACAAGCCCAGCTCACCGAGCAGTGGGAGCATGAAAAATCGGTCATGGCAAGACTTCAGTCGATCAAAGAAGAGTTGGAAAGAGTTCAAAAGAGGATTGCAGACAGGAAGATGAAGATCCATGTCAGCGAAGCTGCAGTTCAGCTCCTTGGAAACCTTGGCTACGATCCAAACTATGGAGCCAGGCCGGTGAAGGTTTATAACCTATGCATAGAAGAATCATACGATCCATCTCATTTTCATGGCCGTGTAGAGGCATTTCCTTTTGATGACAACCATGTCCCTCCTCTTCAAATGATTAAGCTTTTCTGCGAGAGTGTTCATTCGTGGCTATCATGTGCAGGCAAAGGTCGAACGGGCCTGATGGTATGTGCCTATCTTGTATACAGTGGCATGTCAGCGGAGGAGGCGCTCCAGTTGTATGCCCATAGGAGGACCACCAATAATGAAGGGGTAAGAACAGTGTTTTCAAATGAACAGGTCTCGATTCCTAGCCAACGACGTTACGTGGGCTACTGGGCAAGTTTACTTTCTTTTCCTAAGGGTGTTGCTCATGGACCTCCAGATGTAAAATTTTCAAAAGCTTGTAGTAGGGAACTGCGCCGAATTCGGCTTTATGACACAATTAATATTGAATCAGTAATCTTTGTCATCACGGAGCTCCAAGAAGCTTCAAGTAAATTGTACACTCCATCTGTCGAAGTTACGCGGAGTTATTGCAGGCGAATAAAGAAAGGTTATCAGAGAAGCGACAGCCATCAGTACTATCTCTCTTTTGTCGAAGATGATCAAAAAAGGAACATGACAGAAGAAGAAAAATATCATAATGTAGTTCAAATGGACACGGAGATTCCAGTATTCTACGAAAAGTCCTGTCTTGACTACAATTTCAATAAACCTTTAACAGTAACTGGCGACGTGCGAGTCATATTCTATCAGAAAATGATTGGAGGGCGTCTCTTCTATGCCTGCTTCAACACATCCTTCATCAAGAACAGCTTGCTTCAGCTTACTGCTGGTGAGTTGGATAAAGTTGGGAGTAGAGGTAAATCAATATGTGGCCCCGCCTTTTGCTTGGAGCTCCTATTCGGACCTGCCAATGCTAAACACTCGTTTTCGACTTGGTCCGACAATGGTGATTCTTCAGACGAGGCATTCTAA | 1920 | 44.06 | MLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRRNIVLLQLISLDMGALIGGAKYQGEFEDRLKAVLKEVTESDGQVVLFIDEIHTVVGAGTPTNLLKPMLGRGELRCIGTTTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILQGLRERYELHHGVRISDGALVEAAILSDRYISGRFLSDKGNHFPFRDEAAAKLKMEITSKSTAVDEINRAVLKLEMERLLLTNDTDKASKERLNRLDGELSLLKEKQAQLTEQWEHEKSVMARLQSIKEELERVQKRIADRKMKIHVSEAAVQLLGNLGYDPNYGARPVKVYNLCIEESYDPSHFHGRVEAFPFDDNHVPPLQMIKLFCESVHSWLSCAGKGRTGLMVCAYLVYSGMSAEEALQLYAHRRTTNNEGVRTVFSNEQVSIPSQRRYVGYWASLLSFPKGVAHGPPDVKFSKACSRELRRIRLYDTINIESVIFVITELQEASSKLYTPSVEVTRSYCRRIKKGYQRSDSHQYYLSFVEDDQKRNMTEEEKYHNVVQMDTEIPVFYEKSCLDYNFNKPLTVTGDVRVIFYQKMIGGRLFYACFNTSFIKNSLLQLTAGELDKVGSRGKSICGPAFCLELLFGPANAKHSFSTWSDNGDSSDEAF | 639 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 40391686 | 40411089 | - | Bda000576.1 | Bda13g01705 | 19836 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g01705 | 639 | Gene3D | Protein tyrosine phosphatase superfamily | 309 | 448 | IPR029021 | - | |
Bda13g01705 | 639 | PANTHER | ATP-DEPENDENT CLP PROTEASE | 2 | 282 | - | - | |
Bda13g01705 | 639 | SMART | AAA_5 | 1 | 140 | IPR003593 | - | |
Bda13g01705 | 639 | Pfam | ATPase family associated with various cellular activities (AAA) | 1 | 132 | IPR003959 | GO:0005524|GO:0016887 | |
Bda13g01705 | 639 | PANTHER | ATP-DEPENDENT CLP PROTEASE | 279 | 319 | - | - | |
Bda13g01705 | 639 | Coils | Coil | 265 | 292 | - | - | |
Bda13g01705 | 639 | Pfam | AAA lid domain | 140 | 244 | IPR041546 | - | |
Bda13g01705 | 639 | PANTHER | BNAC09G42450D PROTEIN | 2 | 282 | - | - | |
Bda13g01705 | 639 | CDD | AAA | 1 | 134 | - | - | |
Bda13g01705 | 639 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 314 | 398 | IPR029021 | - | |
Bda13g01705 | 639 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 540 | 618 | IPR035892 | - | |
Bda13g01705 | 639 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 309 | 433 | IPR029023 | - | |
Bda13g01705 | 639 | PANTHER | BNAC09G42450D PROTEIN | 279 | 319 | - | - | |
Bda13g01705 | 639 | Pfam | C-terminal, D2-small domain, of ClpB protein | 276 | 318 | IPR019489 | - | |
Bda13g01705 | 639 | Gene3D | - | 141 | 308 | IPR027417 | - | |
Bda13g01705 | 639 | Gene3D | - | 1 | 140 | IPR027417 | - | |
Bda13g01705 | 639 | ProSiteProfiles | C2 tensin-type domain profile. | 454 | 619 | IPR014020 | - | |
Bda13g01705 | 639 | Pfam | C2 domain of PTEN tumour-suppressor protein | 533 | 616 | IPR014020 | - | |
Bda13g01705 | 639 | Coils | Coil | 241 | 261 | - | - | |
Bda13g01705 | 639 | Gene3D | - | 486 | 621 | - | - | |
Bda13g01705 | 639 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 299 | IPR027417 | - | |
Bda13g01705 | 639 | SMART | PTEN_C2_2 | 475 | 618 | IPR014020 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda13g01705 | Bda-Chr13:40391686 | Bda04g01287 | Bda-Chr4:63362453 | 1.14E-97 | dispersed | |
Bda14g01451 | Bda-Chr14:19537856 | Bda13g01705 | Bda-Chr13:40391686 | 2.07E-20 | dispersed | |
Bda15g00847 | Bda-Chr15:13141380 | Bda13g01705 | Bda-Chr13:40391686 | 1.90E-20 | dispersed | |
Bda13g01705 | Bda-Chr13:40391686 | Bda13g01707 | Bda-Chr13:40414993 | 3.74E-18 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g01705 | K03695 | K01110 | zju:107415906 | 469.544 |