Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01729 ATGACACCTGCTGATTCTTCACGTGAGGAGAATGTATATTTGGCGAAGCTGGCAGAACAGGCTGAACGTTATGAGGAAAAGGTTGAGTTTATGGAGAAAGTTGCAAAGACCGTGGATGTCGAGGAGCTGACTGTAGAAGAAAGGAACCTTCTATCTGTGGCTTATAAGAATGTGATTGGGGCTAGGAGGGCTTCATGGAGAATCATTTCTTCCATTGAGCAGAAAGAGGAGAGTAGGGGAAATGAAGATCACGTTGCAACAATCAAGGACTACCGAGGAAAGATTGAAAATGAACTAAGCAAGATCTGTGATGGGATTTTAAGTCTTCTCGAATCTCATCTCATCCCATCTGCATCATCTGCTGAGTCTAAAGTTTTTTATCTCAAAATGAAGGGGGATTATTACAGGTATCTTGCTGAGTTTAAGACTGGAGCTGAGAGAAAGGAAGCTGCTGAGAGCACATTGTTTGCTTACAAGTCTGCTCAGGACATTGCTCTTGCAGATCTAGCTCCCACTCACCCTATTAGGCTTGGACTTGCACTTAATTTTTCGGTGTTTTACTATGAAATCCTGAACTCACCGGATCGTGCTTGCAATCTGGCAAAGCAGTGCCGACAAAAGACCAGAGATTATGCGGCCGCATGTAAGAACCGGAAAGGGAAGAAGCCATGTACGATAAAATTTTGTCATAAATGCTTGTTGAACAGATATGGCGAGAACGCTGAGAAAGTGGAGCTTTTGGATGATTGGGATTGTCCCAAGTGCAGAGGGGTTTGCAATTGCAGTTTTTGCATGAAAAAAAGAGGTCACAAACCCACTGGCATCATGATACATGCAGCCAAGTCTACTGGATTTAATTCTGTTTCAGAAATGTTGCAAGTAAACAGCAATGACAATATAGATCCTGAACAAAATTCACCTCAAAAGCAAGCTCTAGGAAACAAGCTGAATTTGAAAAAAGGATATGGGGAATCCTTACTCCGAGAACTAATGCGTGAAAGAAGAAGCTGTCGAGTGCAGGATACCTTGCCTGTTCGGTTTCAAATCCAAATTTTGTCTTTGATACTAAAGAATATTGGAGAAGAGTATCCATCCTCATGTTCAACGAATGACAAATCTTCTTGGTTGAAAGCTTTACAAAAATGCCCTGCTGCGTCTTCATGGGCATTGAATGAACTGCCATCAGATTATTTTGATAGAGTCGGTGGTTGTTATGAGAAACTAAGCTTGTCAACAAAGCTTAGATTACTGAATTTTCTTTGTGATGAGGCTCTTAGTACTGTAGAATTGAGAAATTGGATTGTGAAGAGCCAGAAGGAAGCAAGAGAGAAAGTTGTTGCTGTGAAGGATAAGATCTCATTCGGTGTTATTGGCCTTAGCCTTGGCATTTCTCTCTTATCGTATGGATTTGGGGCATATTTTAATATCCTGCCAGGATCAGAATGGTCAGCTATAATGTTAACATATGGTTTTCCTCTTGCAATTATTGGTATGGCACTCAAGTATGCAGAGCTCAAACCAGTGGCATGTTTGACTTACTCAGATGCTCAAGAGTTGAGGGAATCATGCGCTACTGCAATTCTTAAACAGGTAAGAAGTGATGTTATACGAGGTGGAGGAATTCCACGACGGAGTGCGCCCACTCTGGAATCGATTCGTGAAGAAGTAACAGAAGATGGAAAATATTGTTTAGTCCTGGTGTTCAAAGCAAAAGATCTGCAACTAGCAAAATTTACGTCATTCTTTGGACCAGGAATTACAGCAGAAATTGGAAAAGGAGAGAATGATATATATGAAGTGCGCCTCATTTCCCTCGCCGAACCTAATGCCTCAAAGACATAA 1842 41.42 MTPADSSREENVYLAKLAEQAERYEEKVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVATIKDYRGKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYYRYLAEFKTGAERKEAAESTLFAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQCRQKTRDYAAACKNRKGKKPCTIKFCHKCLLNRYGENAEKVELLDDWDCPKCRGVCNCSFCMKKRGHKPTGIMIHAAKSTGFNSVSEMLQVNSNDNIDPEQNSPQKQALGNKLNLKKGYGESLLRELMRERRSCRVQDTLPVRFQIQILSLILKNIGEEYPSSCSTNDKSSWLKALQKCPAASSWALNELPSDYFDRVGGCYEKLSLSTKLRLLNFLCDEALSTVELRNWIVKSQKEAREKVVAVKDKISFGVIGLSLGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVACLTYSDAQELRESCATAILKQVRSDVIRGGGIPRRSAPTLESIREEVTEDGKYCLVLVFKAKDLQLAKFTSFFGPGITAEIGKGENDIYEVRLISLAEPNASKT 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 40605875 40617535 - Bda000602.1 Bda13g01729 19860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01729 613 PANTHER 14-3-3-LIKE PROTEIN GF14-F 5 204 - -
Bda13g01729 613 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 200 292 IPR018866 -
Bda13g01729 613 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Bda13g01729 613 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Bda13g01729 613 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Bda13g01729 613 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Bda13g01729 613 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Bda13g01729 613 SUPERFAMILY 14-3-3 protein 7 215 IPR036815 -
Bda13g01729 613 SMART 1433_4 8 221 IPR023410 -
Bda13g01729 613 Pfam 14-3-3 protein 14 208 IPR023410 -
Bda13g01729 613 Coils Coil 14 41 - -
Bda13g01729 613 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Bda13g01729 613 Pfam Protein of unknown function (DUF2854) 468 537 IPR021275 -
Bda13g01729 613 Pfam Protein of unknown function (DUF2854) 543 590 IPR021275 -
Bda13g01729 613 PANTHER 14-3-3 PROTEIN 5 204 IPR000308 -
Bda13g01729 613 Gene3D - 1 226 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01729 Bda-Chr13:40605875 Bda13g01393 Bda-Chr13:36620851 1.27E-119 dispersed
Bda11g01416 Bda-Chr11:18693824 Bda13g01729 Bda-Chr13:40605875 2.27E-14 transposed
Bda13g01757 Bda-Chr13:40906637 Bda13g01729 Bda-Chr13:40605875 3.66E-75 transposed
Bda13g01758 Bda-Chr13:40912398 Bda13g01729 Bda-Chr13:40605875 3.16E-106 transposed
Bda01g01183 Bda-Chr1:47114550 Bda13g01729 Bda-Chr13:40605875 6.84E-136 wgd
Bda13g01729 Bda-Chr13:40605875 Bda13g01756 Bda-Chr13:40903858 8.24E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01729 K06630 - csv:101222068 379.793