Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g01768 | ATGCGGATGAGCTGCAATGGTTGCAGGGTGCTGCGCAAAGGATGTAGTGAAAATTGTAGCATTAGACCTTGTTTGCAGTGGATCAAAAGCCACGACTCTCAAGCGAACGCTACAGTATTCCTCGCAAAGTTTTATGGCCGTGCCGGCCTTATGAATCTAATTAACGCCGGCCCTGACCATCTCCGACCTGGTGAGATTTTGAGGTTCCTCATTCGTTTTTTGTTTTCCTCTGCATGCATTTGTGAATTTGCTGGGATTGATGGATTTTGGTGGTTTTCAGCCATTTTTAGGTCTTTGCTGTACGAAGCTTGCGGGAGGATTGTTAATCCAATTTATGGATCCGTCGGGTTGCTGTGGTCTGGGAGCTGGCAACTCTGCCAAGCTGCCGTCGAAGCGGTGCTGAAAGGAGATCCGATTACTCCGATTACTTCAGAAGCTGCGGCGAACTGTGATGGACCGCCGCTTAAGCCCTATGATATCCGGCATGTGTCGAAGGATGTGAACTCCACCGCGTCAGATCGTCTCCGGCGAGGGAAGACTCGCTGCCGGTTGCATCGCTCCGTCGGAAAGCCGAAGCCGAGTAAAGATTCTCGGAAAGGTTCCGTCGTCGATCGAGTGGGCGATTTCTTCCCCGACCAGATGAACAGGTCTACGAGTCACGAGTCCTCTCTCAGTCACCAGTCCGACGCCGCCCCTAACGTGGAGAACGAGAGCAAGGAATCGGAGAGCATCGTCTCCGTCGAGACAGCCGATGCTTCGGCCCCGGCGCTGATCCGATCAGAAACAGATTCCTTTCCTAAGCGGAAGTACGAAGCAATCGAAGAAGGAGACGTCACCCTGGAGCTTACCTTAGGGTTGAAACCTTCGATGTCACGCGCCACGCACGTAGTTCCTATGAAGAAGCGAAAAGTCGACCACTCCCCAACCGGCGCGTGTAAGACAGAGCTGGGCCTTGACTTGCAGGTTTAA | 969 | 52.84 | MRMSCNGCRVLRKGCSENCSIRPCLQWIKSHDSQANATVFLAKFYGRAGLMNLINAGPDHLRPGEILRFLIRFLFSSACICEFAGIDGFWWFSAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGDPITPITSEAAANCDGPPLKPYDIRHVSKDVNSTASDRLRRGKTRCRLHRSVGKPKPSKDSRKGSVVDRVGDFFPDQMNRSTSHESSLSHQSDAAPNVENESKESESIVSVETADASAPALIRSETDSFPKRKYEAIEEGDVTLELTLGLKPSMSRATHVVPMKKRKVDHSPTGACKTELGLDLQV | 322 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 40996293 | 40997261 | - | Bda000647.1 | Bda13g01768 | 19899 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g01768 | 322 | MobiDBLite | consensus disorder prediction | 189 | 205 | - | - | |
Bda13g01768 | 322 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 40 | 1 | 69 | - | - | |
Bda13g01768 | 322 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 40 | 94 | 319 | - | - | |
Bda13g01768 | 322 | ProSiteProfiles | LOB domain profile. | 3 | 139 | IPR004883 | - | |
Bda13g01768 | 322 | MobiDBLite | consensus disorder prediction | 212 | 232 | - | - | |
Bda13g01768 | 322 | MobiDBLite | consensus disorder prediction | 180 | 259 | - | - | |
Bda13g01768 | 322 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 69 | - | - | |
Bda13g01768 | 322 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 94 | 319 | - | - | |
Bda13g01768 | 322 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 63 | IPR004883 | - | |
Bda13g01768 | 322 | Pfam | Lateral organ boundaries (LOB) domain | 94 | 133 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g01358 | Bda-Chr8:54032646 | Bda13g01768 | Bda-Chr13:40996293 | 1.60E-42 | dispersed | |
Bda11g01472 | Bda-Chr11:21231420 | Bda13g01768 | Bda-Chr13:40996293 | 1.76E-46 | dispersed | |
Bda01g01171 | Bda-Chr1:46897207 | Bda13g01768 | Bda-Chr13:40996293 | 4.00E-159 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16964 | PF03195 | LOB | 2.50E-09 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g01768 | - | - | fve:101314484 | 365.54 |