Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01801 ATGAAGAGGGAGCATCAGGACGGATCTGGGAAGGGTTTTGGCGGAAGAAGGGGATTTGGGACAGCGGGAAAATCAGAGAGCTCGGTTTTACAGTCCGCGGGAAAGGGTAAGATTTGGGAAGAAGAGCAAGATGCGGGAGGAATGGATGAGCTTCTCGCTGTTTTGGGGTACAAGGTTAGGTCGTCGGACATGGCCGATGTCGCGCAGAAGCTCGAACAGCTCGAAATGGTTATGGGTACTGCTCTGGAAGATGGAATTTCTCATCTCTCTTGCGATGCTGTTCATTACAATCCTTCCGATCTTTCTAGCTGGGTTCAAAGCATGCTTTCCGAGCTTAATAACCCTACGAATAGCCTCGAATCTCTTCCAAATCATAACGATGTTCCGGTTCTTGGTCGCTCGGAAGCTTCCATGGTCGTTAGTGGCGGATTCTCGAATTCTCAGCGGCAGTTCGAGAACCAATCTAGGGTTTTTGACGATTCAGAGTATGATTTGAGAGCGATACCCGGAGTTGCAGTTTATCCTCAAATCGATTCGCCGAGGAAGCGATTAAAAACATCGTTACTGTCAGATTCATCGTCTTCTTCCTCCGGAACCACGGCAGCGACTCCCGACCTATCCCGACCGGTGGTTCTCGTTGATTCGCAGGAAACCGGCGTACGGCTCGTCCACACTCTCATGGGCTGTGCCGAAGCAGTTCAAGAAGATAACATGAAACTCGCCGACGCCCTAGTGAAACACATCGGAATTCTGGCTGCCTCGCAGGCCGGTGCCATGCGAAAAGTGGCCACCTATTTCGCTGAAGCTCTCGCTCGCCGGATTTACAGAATCTACCCACAAGATTGTCTAGACCCATCTTATACCGATCTTCTCCAGATGCACTTTTACGAGACCTGTCCTTATCTCAAGTTTGCTCATTTCACTGCAAATCAAGCAATTCTTGAAGCGTTCGCGACCGCTAGTAGAGTCCACGTAATAGATTTCGGGCTCAAACAGGGCATGCAGTGGCCTGCTTTGATGCAGGCGCTCGCATTACGTCCCGGAGGGCCACCAGCTTTCCGTCTTACAGGAATTGGCCCACCCCAGCCAGATAACACCGACTCTTTACAGCAAGTGGGTTGGAAATTAGCGCAATTGGCCGACACCATTGGAATCAAATTTGAGTTTCGTGGGTTTCTCTGCAAGTCTCTCGCAGATCTGGAGCCGGAAATACTCGACATCCGTCCACCGGAGTTCGAAACCGTGGCGGTGAACTCTGTTTTCGAGCTTCACCGTCTTCTCGCTCGGCCTTCGGCGGTGGAGAAGGTGCTTTCTTCGATCAAGAGTATGAAGCCGAAAATCGTGACGACGGTGGAGCAAGAAGCGAATCACAACGGACCAATTTTCTTGGACCGGTTTACTGAGGCTCTCCACTATTACTCCAATCTGTTTGACTCGTTGGAAGGGTCAGCTCCGCCGAGTCAGGACCTAGTAATGTCTGAGTTGTATCTGGGAAGACAGATATGCAACGTGGTGGCTTGTGAAGGTCCGGACCGAGTCGAGCGGCACGAGACGTTGAGTCAGTGGCAAACTCGGATGGGATCGGCAGGATTTGACCCAGTTCACCTAGGATCTAACGCGTTCAAGCAGGCGAGCATGTTGTTGGCTCTGTTCGCCGGAGGAGATGGATACAGGGTAGAGGAAAACAATGGTTGTTTGATGCTTGGATGGCACACCCGGCCTTTGATCGCCACCTCGGCCTGGCAACTCGCCGCCGGGGAAACCCAGTGA 1770 51.86 MKREHQDGSGKGFGGRRGFGTAGKSESSVLQSAGKGKIWEEEQDAGGMDELLAVLGYKVRSSDMADVAQKLEQLEMVMGTALEDGISHLSCDAVHYNPSDLSSWVQSMLSELNNPTNSLESLPNHNDVPVLGRSEASMVVSGGFSNSQRQFENQSRVFDDSEYDLRAIPGVAVYPQIDSPRKRLKTSLLSDSSSSSSGTTAATPDLSRPVVLVDSQETGVRLVHTLMGCAEAVQEDNMKLADALVKHIGILAASQAGAMRKVATYFAEALARRIYRIYPQDCLDPSYTDLLQMHFYETCPYLKFAHFTANQAILEAFATASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDSLQQVGWKLAQLADTIGIKFEFRGFLCKSLADLEPEILDIRPPEFETVAVNSVFELHRLLARPSAVEKVLSSIKSMKPKIVTTVEQEANHNGPIFLDRFTEALHYYSNLFDSLEGSAPPSQDLVMSELYLGRQICNVVACEGPDRVERHETLSQWQTRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQLAAGETQ 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 41827051 41828820 - Bda000689.1 Bda13g01801 19932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01801 589 MobiDBLite consensus disorder prediction 186 204 - -
Bda13g01801 589 Pfam Transcriptional regulator DELLA protein N terminal 49 116 IPR021914 -
Bda13g01801 589 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 582 IPR005202 -
Bda13g01801 589 SMART DELLA_2 49 122 - -
Bda13g01801 589 Gene3D - 47 112 IPR038088 -
Bda13g01801 589 MobiDBLite consensus disorder prediction 1 42 - -
Bda13g01801 589 Pfam GRAS domain family 222 582 IPR005202 -
Bda13g01801 589 PANTHER DELLA PROTEIN RGL1 43 582 IPR030006 GO:0003712|GO:0005634
Bda13g01801 589 MobiDBLite consensus disorder prediction 185 205 - -
Bda13g01801 589 ProSiteProfiles GRAS family profile. 213 582 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01823 Bda-Chr1:54372487 Bda13g01801 Bda-Chr13:41827051 0 dispersed
Bda07g01379 Bda-Chr7:16636008 Bda13g01801 Bda-Chr13:41827051 4.81E-97 dispersed
Bda09g01170 Bda-Chr9:42548293 Bda13g01801 Bda-Chr13:41827051 1.17E-14 dispersed
Bda11g00148 Bda-Chr11:1930930 Bda13g01801 Bda-Chr13:41827051 0 dispersed
Bda14g01380 Bda-Chr14:16405423 Bda13g01801 Bda-Chr13:41827051 3.29E-75 dispersed
Bda14g00911 Bda-Chr14:7061331 Bda13g01801 Bda-Chr13:41827051 1.06E-22 transposed
Bda01g01147 Bda-Chr1:46545196 Bda13g01801 Bda-Chr13:41827051 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16968 PF03514 GRAS 2.20E-135 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01801 K14494 - tcc:18601873 889.026