Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01813 ATGGCGATTTTAAACTCCGAGCCAAATGGGTCATCTACTTCTTACCGATTGGGAGCTTCTGCGAGGTTTAATGGCATCTCGACGCCGTTACACCATCAGTTTCATCATAATCTGAATCAATTTGGCGTTGGACCGTCTGATCAAGGTTCTAATGGGTTGATGAGATCTAGATCTTTGCAAAAATTTCCAGCGAAACGCAGTATGAGAGCTCCTAGGATGAGGTGGACGAGTACTCTTCATGCTAGATTTGTTCATGCTGTTGAGCTTCTTGGAGGCCATGAAAGAGCTACTCCAAAGTCAGTTCTTGAGCTTATGGATGTCAAAGATCTCACATTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGAACTGTTAAAACCACTGACAAGCCTGCTGCTTCCTCAGATGGGTCTGGAGAGGATGATATTTCGCCAATGGGTAATTCAAATGACCTTGGCATAAGACAAATTGGAAAAGATCAAGGAGGACCATCCGATCGGTTGGGGCAACAAGATATGGACTATGCTTTCTCCACCCTTTGGTCTAATTCTTCAAGTTGTAGAGAATCTCGGGCACACACTAACTCCAGTGGCATAGAAATGATCAGATCTGCATCTTTCCCATCTCACCAAAAAGCTGGCCACCAACATGAGGAATGTGATTCGGCTCGGAAAATGTACGGAAGGTCAAGTTCGGACTGTAAGAACCCGAGCTTGGAGTTCACATTAGGCAGACCAGATTGGGTTGTAAAGGAAGATGACTGA 765 44.71 MAILNSEPNGSSTSYRLGASARFNGISTPLHHQFHHNLNQFGVGPSDQGSNGLMRSRSLQKFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSDGSGEDDISPMGNSNDLGIRQIGKDQGGPSDRLGQQDMDYAFSTLWSNSSSCRESRAHTNSSGIEMIRSASFPSHQKAGHQHEECDSARKMYGRSSSDCKNPSLEFTLGRPDWVVKEDD 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 42044070 42047686 + Bda000701.1 Bda13g01813 19944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01813 254 MobiDBLite consensus disorder prediction 126 170 - -
Bda13g01813 254 MobiDBLite consensus disorder prediction 141 155 - -
Bda13g01813 254 MobiDBLite consensus disorder prediction 227 254 - -
Bda13g01813 254 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 71 124 IPR006447 GO:0003677
Bda13g01813 254 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 14 253 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bda13g01813 254 PANTHER TRANSCRIPTION REPRESSOR KAN1 14 253 - -
Bda13g01813 254 Pfam Myb-like DNA-binding domain 72 123 IPR001005 -
Bda13g01813 254 SUPERFAMILY Homeodomain-like 68 124 IPR009057 -
Bda13g01813 254 Gene3D - 70 127 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00856 Bda-Chr6:11789833 Bda13g01813 Bda-Chr13:42044070 4.25E-36 dispersed
Bda09g00611 Bda-Chr9:8857538 Bda13g01813 Bda-Chr13:42044070 3.60E-18 dispersed
Bda13g01813 Bda-Chr13:42044070 Bda07g01170 Bda-Chr7:13944504 4.69E-20 dispersed
Bda01g01484 Bda-Chr1:50748641 Bda13g01813 Bda-Chr13:42044070 1.43E-12 transposed
Bda07g00081 Bda-Chr7:1040335 Bda13g01813 Bda-Chr13:42044070 6.87E-06 transposed
Bda07g01024 Bda-Chr7:12102555 Bda13g01813 Bda-Chr13:42044070 1.60E-21 transposed
Bda01g01128 Bda-Chr1:46166889 Bda13g01813 Bda-Chr13:42044070 2.54E-117 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16970 PF00249 Myb_DNA-binding 2.00E-05 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01813 - - vvi:100244905 322.398