Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01815 ATGGGGAAGGTCCCAAAGGAATACTCCTCACTTCTTTCGTCATTACAAGATCAGGCAGTTCCTTGTTCGTTCGAAATTATAGAAGAAGTGCTAATCAACAATCTGGGACCTGATTTATCCGAAATATTTTTGTCATTTGAGGAACAACCTGTAGCTGCTGCATCTATTGCTCAAGTTCACCGTGCGATTTTGAAAAATCGTCAAGAAGTTGCAGTCAAGGTACAGTATCCTGGATTGGAAAGACAGATGAAAATTGACATAATGACCATGTCTTTCCTTTCAAAAATCATAGCGGGGATTTTTCCTGAATTCAGGTTTGATTGGTTGGCATCGGAATTCACAAAGGCCATTCACTCAGAGCTTGATTTTATTCAGGAGGCTAAAAATTCAGAGAAAACCTCAAAACATTTCAAAAACAACAAAATGGTCAAAGTTCCGCTTGTATATTGGGAATGGACGACAAGCAAGGTTCTCATAATGCAGTTTTATAGAGGTTGCAAGGTTGATGACGTGGAATTCATGAAGCAAATGAGAATAAGCCCAAAGAAGGTAGCTAAAATACTGGTTGAAGTCTTTGCAGAAATGATATTCATCCATGGTTTCTTGCATGGAGATCCACACCCTGGTAATATATTAATCTCTCCAGAAGGTCATGGTGGCTTTTCTTTGGTTCTCTTAGATCATGGCATCTACAGACAGTTTGATGAGGATTTTAGGTTGGATTATTGCCAGCTTTGGAAGGCTTTGATCCTTCTTGATACAAATACAATACAGCAGGTTGGTGGACGGTTTGGTGTTGGGAAATATTCTAGATACTTTCCTCTCATATTCACTGGAAGAACAATTGATAGTAAATCTGCTTTTGGGAGTGGAATGTCCATCGAAGAGAAAAAGAATTTGAAAGAGGAGGTAAAATTATTAAAGATGGAGGATATATCTTCATTCATGGAGACTCTACCCCCTGACTTGCTCACTATAATGCGTACTGATGGATTACTGAGCTCTATCATAAGAAAGTTGGGGGCTTCACAAACGCTTAGGATGCTAACTTATGCCAAATACGCATTACATGGCCTTTCTCTAAACTTGAATCATGAAAGTGATTTTGGTGCGGTGACATATTCCAGATTAAAGGCGAATTTGAGTTATCTTCATTTAAGAATTGTCCTTGGTGTACTGGAGTTTATTTCCTGGTTTCAAAAGTTGAAGCTTTGCGCTACAAGTTACGTCCAGCAGTTCGAAAAAATCTTATTTGGGAAATTATCCCGCCGAAGGGTAATTGCATGA 1287 38.85 MGKVPKEYSSLLSSLQDQAVPCSFEIIEEVLINNLGPDLSEIFLSFEEQPVAAASIAQVHRAILKNRQEVAVKVQYPGLERQMKIDIMTMSFLSKIIAGIFPEFRFDWLASEFTKAIHSELDFIQEAKNSEKTSKHFKNNKMVKVPLVYWEWTTSKVLIMQFYRGCKVDDVEFMKQMRISPKKVAKILVEVFAEMIFIHGFLHGDPHPGNILISPEGHGGFSLVLLDHGIYRQFDEDFRLDYCQLWKALILLDTNTIQQVGGRFGVGKYSRYFPLIFTGRTIDSKSAFGSGMSIEEKKNLKEEVKLLKMEDISSFMETLPPDLLTIMRTDGLLSSIIRKLGASQTLRMLTYAKYALHGLSLNLNHESDFGAVTYSRLKANLSYLHLRIVLGVLEFISWFQKLKLCATSYVQQFEKILFGKLSRRRVIA 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 42074884 42079955 + Bda000704.1 Bda13g01815 19946

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01815 428 Gene3D Transferase(Phosphotransferase) domain 1 109 244 - -
Bda13g01815 428 PANTHER ABC1 FAMILY PROTEIN 3 394 - -
Bda13g01815 428 PANTHER AARF DOMAIN CONTAINING KINASE 1 (PREDICTED) 3 394 - -
Bda13g01815 428 SUPERFAMILY Protein kinase-like (PK-like) 16 247 IPR011009 -
Bda13g01815 428 CDD ADCK1-like 14 265 IPR045307 -
Bda13g01815 428 Pfam ABC1 atypical kinase-like domain 14 260 IPR004147 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01815 K08869 ADCK, ABC1; aarF domain-containing kinase - csin:114294894 572.007
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01815 Bda-Chr13:42074884 Bda15g00319 Bda-Chr15:6009567 2.25E-48 dispersed
Bda13g01815 Bda-Chr13:42074884 Bda14g01020 Bda-Chr14:8597607 5.87E-46 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g719 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda13g01815 Bpe14g00064 . . Bma02g00561 . . . . . . . . . . . . . . . . . . . . . . . Lsi06g00766 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007859 1 6 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 2 1 2 1 1 1 1 1 36