Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g01832 | ATGGCATCTTCGTCCAACTCCCCCTGTGCAGCCTGCAAATTTCTCCGCCGGAAATGTCAGCTTGAGTGCGTTTTTGCTCCCTACTTCCCGCCCGACCAACCTCAAAAATTCGCAAACGTACACAAAGTGTTCGGAGCAAGCAATGTCACGAAGCTTCTCAACGAGCTCCACCCCCATCAGCGAGAAGATGCCGTCAATTCTCTCGCCTACGAGGCCGACATGCGCCTCCGAGATCCGGTCTATGGGTGTGTGGGGGTCATCTCCCTCCTTCAGCACCAACTCCGGCAGCTCCAAATCGACCTCAGCTGCGCAAAATCCGAGCTCTCGAAATACCAAAATCTCGGCCTGACCGGGCATGGCCTCATTGCCGCCGCTGCAGCAGCTGCCACTTCCACTCACAACCACCACCACCTGCAGAACCTCGGAATCAACCTGATTGGCTCCGGCAAAGATTATCACCACCACCACCACCAACTTTTCCCTCGCGATCAGGCCCAGCCGATCGGGAGGGGCTTTGACATTGCCGGAAACAGCGTTTACGATGGCGGTCTTCTTGCGATGAATGTTTCTAGTTTGGGCCAACTCAATCAGTTTCAGCAACCGAGGGCTGGAGGCGATGATCACCGCCGAACGATCGATCCCTCTTAG | 648 | 55.86 | MASSSNSPCAACKFLRRKCQLECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQNLGLTGHGLIAAAAAAATSTHNHHHLQNLGINLIGSGKDYHHHHHQLFPRDQAQPIGRGFDIAGNSVYDGGLLAMNVSSLGQLNQFQQPRAGGDDHRRTIDPS | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 42352205 | 42352852 | - | Bda000723.1 | Bda13g01832 | 19963 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g01832 | 215 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 6-LIKE | 3 | 184 | - | - | |
Bda13g01832 | 215 | Coils | Coil | 87 | 114 | - | - | |
Bda13g01832 | 215 | Pfam | Lateral organ boundaries (LOB) domain | 8 | 105 | IPR004883 | - | |
Bda13g01832 | 215 | ProSiteProfiles | LOB domain profile. | 7 | 108 | IPR004883 | - | |
Bda13g01832 | 215 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 3 | 184 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01424 | Bda-Chr11:18932366 | Bda13g01832 | Bda-Chr13:42352205 | 9.81E-53 | dispersed | |
Bda13g01832 | Bda-Chr13:42352205 | Bda15g00546 | Bda-Chr15:8519291 | 9.24E-58 | dispersed | |
Bda01g01103 | Bda-Chr1:45777636 | Bda13g01832 | Bda-Chr13:42352205 | 1.32E-148 | wgd | |
Bda13g01832 | Bda-Chr13:42352205 | Bda07g01123 | Bda-Chr7:13134567 | 1.22E-73 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16972 | PF03195 | LOB | 3.00E-42 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g01832 | - | - | jre:109004073 | 352.058 |