Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01838 ATGATTCCTTTCCCTGGAGTCTTAGCTACTCAAGAGTCAATCTCTGAGTTCATCAGTCAAGTAGCAAATCTTGTCAAGCTTGTTGATTCGAGAGACATTGTAGAATTGCAGTTAAAACAGCTTGACTGTGAAGTAGTTATCCGTAAAAAGGAGGCTTTACCACAAACACCTTTGCCTTTGCCACCCACCATGACATATTCACCCTCTCCACCAGTCGTGGCACCAGCCCCACCTTTGCCCGCACCTACAGCAGCCCCTGCTTCTTCTCCAGTACCAAGGCAGACTTCCTCTGCTTCTGCTGCCAAATCATTACTTCCACCTTTAAAGTGCCCCATGGCAGGGACGTTCTATCGAAGTCCAGCACCTGGTGAACCTCCACTTGTTAAGGTTGGAGACAGAGTAACGAAAGGACAGGTTTTGTGCATTATAGAAGCCATGAAACTGATGAATGAAATAGAGGCTGATCAATCAGGTACCATTATTGAGATCATTGCCGAAGACGGAAAGCCGGTCAGCATTGACATGGTTAGTATTTTTTGGTGGTATGATCTGACTACTAATGTAAATAGAATGCTCTAG 579 45.25 MIPFPGVLATQESISEFISQVANLVKLVDSRDIVELQLKQLDCEVVIRKKEALPQTPLPLPPTMTYSPSPPVVAPAPPLPAPTAAPASSPVPRQTSSASAAKSLLPPLKCPMAGTFYRSPAPGEPPLVKVGDRVTKGQVLCIIEAMKLMNEIEADQSGTIIEIIAEDGKPVSIDMVSIFWWYDLTTNVNRML 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 42480162 42481984 - Bda000730.1 Bda13g01838 19969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01838 192 ProSiteProfiles Biotinyl/lipoyl domain profile. 100 189 IPR000089 -
Bda13g01838 192 MobiDBLite consensus disorder prediction 57 98 - -
Bda13g01838 192 TIGRFAM BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 18 174 IPR001249 GO:0003989|GO:0006633|GO:0009317
Bda13g01838 192 CDD biotinyl_domain 108 176 - -
Bda13g01838 192 Gene3D - 107 178 - -
Bda13g01838 192 PRINTS Acetyl-CoA biotin carboxyl carrier protein signature 142 155 IPR001249 GO:0003989|GO:0006633|GO:0009317
Bda13g01838 192 PRINTS Acetyl-CoA biotin carboxyl carrier protein signature 110 123 IPR001249 GO:0003989|GO:0006633|GO:0009317
Bda13g01838 192 PRINTS Acetyl-CoA biotin carboxyl carrier protein signature 127 141 IPR001249 GO:0003989|GO:0006633|GO:0009317
Bda13g01838 192 Pfam Biotin-requiring enzyme 108 174 IPR000089 -
Bda13g01838 192 MobiDBLite consensus disorder prediction 57 87 - -
Bda13g01838 192 ProSitePatterns Biotin-requiring enzymes attachment site. 137 154 IPR001882 -
Bda13g01838 192 SUPERFAMILY Single hybrid motif 108 174 IPR011053 -
Bda13g01838 192 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 7 175 - -
Bda13g01838 192 PANTHER BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE, CHLOROPLASTIC 7 175 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01358 Bda13g01838 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01327 Bda-Chr7:16050334 Bda13g01838 Bda-Chr13:42480162 7.49E-57 dispersed
Bda10g00787 Bda-Chr10:42250730 Bda13g01838 Bda-Chr13:42480162 4.13E-07 dispersed
Bda12g00179 Bda-Chr12:1678037 Bda13g01838 Bda-Chr13:42480162 1.11E-54 dispersed
Bda01g01094 Bda-Chr1:45707822 Bda13g01838 Bda-Chr13:42480162 1.20E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01838 K02160 - csin:114258619 213.001