Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g01849 ATGGAAGTGGAGGACAGCGATGAAGGCGGCGATGTCTTGATTCCTCCGCCCAATTTCTCCATGGTTGAGGATGGAATTTTTAGATCCAGTTTTCCTCATCCTTCCAACTTTTCTTTTATTCGGACGCTGAATCTTCGCTCTGTCTTATATTTGTGTACAGACCCATATCCAGAAGAAAATATGGAGTTTCTTCGAGCCCAAAATATTCGGCTTTTTCAATTTGGAATAGAGGGGAAAACGGATCCTCCTGTATCTATGCCGAAGGCTACAATCATGAATGCGTTGAAAGTTCTAATCGATGTTAGGAATCACCCCATCTTGATCCATTGCAAGGCGGGGAAGCATCGAACAGGCTGTCTTGTTGGTTGCCTGCGGAAACTGCAGAACTGGTGTTTGTCATCCGTGCTGGAGGAGTATGGGCGCTTCGCCGGTGTGAAATCAAGGAAGGCCGATCTGAGATTCATCGAAACATTTGATATTTTCTTACTGAGACAATGCCTTCACAGCATCATATACCAGTATCAAGGATACGGCTCGAAGAAAAGACGCCTTCTCTACAAAGAAGAGACCGTACAAACACCATCGAAAATCGCATCAAGTTAG 603 44.78 MEVEDSDEGGDVLIPPPNFSMVEDGIFRSSFPHPSNFSFIRTLNLRSVLYLCTDPYPEENMEFLRAQNIRLFQFGIEGKTDPPVSMPKATIMNALKVLIDVRNHPILIHCKAGKHRTGCLVGCLRKLQNWCLSSVLEEYGRFAGVKSRKADLRFIETFDIFLLRQCLHSIIYQYQGYGSKKRRLLYKEETVQTPSKIASS 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 42604328 42606254 - Bda000742.1 Bda13g01849 19980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g01849 200 Gene3D Protein tyrosine phosphatase superfamily 12 161 IPR029021 -
Bda13g01849 200 Pfam Tyrosine phosphatase family 13 162 IPR004861 -
Bda13g01849 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 10 182 - -
Bda13g01849 200 PRINTS Plant and fungal dual specificity phosphatase signature 69 83 IPR020428 GO:0016791
Bda13g01849 200 PRINTS Plant and fungal dual specificity phosphatase signature 50 63 IPR020428 GO:0016791
Bda13g01849 200 PRINTS Plant and fungal dual specificity phosphatase signature 86 100 IPR020428 GO:0016791
Bda13g01849 200 PRINTS Plant and fungal dual specificity phosphatase signature 13 30 IPR020428 GO:0016791
Bda13g01849 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 18 172 IPR020422 GO:0006470|GO:0008138
Bda13g01849 200 CDD PFA-DSP_Siw14 13 159 - -
Bda13g01849 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 108 118 IPR016130 GO:0016311|GO:0016791
Bda13g01849 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 10 182 - -
Bda13g01849 200 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 89 121 IPR000387 GO:0016311|GO:0016791
Bda13g01849 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 160 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01849 Bda-Chr13:42604328 Bda14g01411 Bda-Chr14:17606706 1.16E-72 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g01849 K18045 - zju:107412514 312.768