Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00003 ATGTCTCAGAATATTCAAACCCACCCTTCTCTTCATTCAATAAAATCATTGCCGGCTAATTATCGAGCAATGGGTTACCGAGTCTCTAACAGCTTCAAAGAGTCCCGAGGTTTGACTGTTGGAAGTGGGAAAATAGGCTCCTTAACTATTCCTGAAAATGGTGCATTAGCGGATGGAGCTGTTGAGAGATTTCAGAACAATGACGACGACTCACCATATTCCGAGAGTGTGATATCAGTCAAAGAAAGGCCTGCTTTAGGTGACAGAGATGTTGGTTCTATCGCATTGCCTTCGCTTCCAACTGTTGCATCACATGGTCAATACAAGTGGGATGACACTTCCTCCTACGCGACCAAAAAGGTACTTCAATCTTGGTTTCAACTTCCGGATGGTAAGTGGGAGCTGATAAAGCTGTTGTCTGTATCAGGAGCTGAATCTGTCATTTTACTGCCTGATGGGAAAGTCTTAAAAATTAAGCCTGAGAGTTTGATGCCGGCAAATCCAGATATTCTTGATGGTATAGATGATCTGATGCAACTTAGTTATTTAAACGAACCATCAGTTCTATACAATCTTCAATGCAGATACAATCAAGATATGATTTATACTAAAGCTGGGCCAGTGCTGGTTGCTATCAATCCCTTTAAGAAAGTCGATTTATATGGAAATGATTACATTGACGCATACAAGACTAAATCCATTGAGAGTCCGCATGTGTATGCCATTACTGATACAGCTATACGTGAAATGATACGAGGTAGCTCATGTTTCATTCCTTTTTTGATTGGTGAAAGTGGAGCAGGAAAAACTGAAACTGCAAAAATAGCAATGCAATATTTGGCTGCCATTGGTGGTGGAAGTGGAATTGAATATGAAGTTTTGAAGACGAATCCAATTTTAGAAGCCTTTGGCAATGCAAAAACATTGAGAAATGACAACTCTAGTCGCTTTGGAAAATTGATTGAAATTCACTTTAGTGAAACTGGAAAAATATCTGGTGCGAACATTCAGACGGTTGTTCAATGCATGAAGAATGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGGGCTCCTCCTGCTCTGAGAGAGACTCTAAATTTAAAGAGTGCTCACGAGTACAAATATCTGAGCCAGAGTGAATGTTATTCAATTGCTGGAGTCAATGATGCAGATCAATTCCGGATTGTTATGGAAGCTCTTGATATTGTTCACATCAGCAAGGAGGACCAGCAGAACGTGTTTGCCATGATTGCTACTGTGTTGTGGCTCGGAAACGTTACATTTTTTGTGATAGACAATGAGAACCACGTTGAAGCCGTAGCTGATGAAGGTCTATTTACTGCTGCTAAATTGATTGAATGTAACATTGAAGAGCTAAATCTGGCTTTATCTACTCGGAATATGAGAGTTGGGAATGATAATATTATCCAGAAGTTAACACTATCACAAAGTTCTAAAATTTTTACTCCATTAAGATTCTTATATGTTATTCACTTGCAGGCAATTGATGCCAGAGATGCTTTGGCTAAGTCAATTTATGCATGTCTGTTTGAATGGCTCGTTGAACAAATCAACAAATCTCTTGTTGTAGGCAAACGCCGAACTGGCAGATCCATTAGTATTCTGGATATCTATGGCTTTGAATCGTTTGATCGTAACAGCTTTGAACAGTTCTGCATAAATTATGCCAATGAGCGACTCCAACAACATTTCAATCGTCATCTGTTCAAGCTAGAGCAAGAAGAATATATCCAAGATGGGATTGACTGGACAAAAGTTGATTTTGATGACAACCAAGATTGTCTTAGCCTATTTGAAAAGAAACCCTTGGGTTTATTGTCCCTGTTAGATGAAGAGTCCACTTTTCCAAATGGATCAGATTTGACCTTTGCTAACAAGCTGAAGCAGCATCTGAATTCTAATTCTTGCTTTAGAGGAGAACGAGGCAAAGCCTTTACTGTTTGTCATTATGCAGGGGAGGTTATGTATGACACAACTGGATTTTTGGAGAAAAACAGGGACTTATTGCACCTAAATTCCATTAAGCTTCTATCCTCTTGTTCACTTGAACTTCCTCAAATATTTGCATCTAGCTTGCTTAATCAATCGGAGAAGCCAGTGGTTGGTCCTTTACATAAATCAGGTGGTGCTGACTCCCAGAAATTAAGTGTGGCAACTAAGTTTAAGGCCCAATTGTTTCAATTGATGCAACGACTTGAGAATACCACTCCACATTTCATTCGCTGTATCAAGCCAAACAACCTTCAATGTCCTGGATTGTACGAGCAAGGACTTGTACTGCAGCAATTGAGATGTTGCGGAGTCCTAGAAGTAGTTAGAATATCGCGATCGGGTTTCCCTACCAGGATGTCACACGAAAAGTTTGCTAGAAGGAGACTTTGTGATGTACTAGGGTTGTTGTCATCTGCTCAACCGGGTTGTCCTCAGTTATACATGTACAGCTCTGCAGACAGAGTCATTCCTGCTGCGTCTGTTGAAATCTTCATGGAACAGCAAAGAAGAGCGGGGCGTGAGGTTAGGGCCTGCAATTTTGTATCCACGCCTCATGTGGATCATTTTAGAAATGACCCTATTCTTTATTCTTCTCAACTTACCCTGTTTTTAGAGGATTGCGTTCTAACTTGTTGCAAACAGTCCCATTAG 2670 40.11 MSQNIQTHPSLHSIKSLPANYRAMGYRVSNSFKESRGLTVGSGKIGSLTIPENGALADGAVERFQNNDDDSPYSESVISVKERPALGDRDVGSIALPSLPTVASHGQYKWDDTSSYATKKVLQSWFQLPDGKWELIKLLSVSGAESVILLPDGKVLKIKPESLMPANPDILDGIDDLMQLSYLNEPSVLYNLQCRYNQDMIYTKAGPVLVAINPFKKVDLYGNDYIDAYKTKSIESPHVYAITDTAIREMIRGSSCFIPFLIGESGAGKTETAKIAMQYLAAIGGGSGIEYEVLKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTVVQCMKNERSYHIFYQLCAGAPPALRETLNLKSAHEYKYLSQSECYSIAGVNDADQFRIVMEALDIVHISKEDQQNVFAMIATVLWLGNVTFFVIDNENHVEAVADEGLFTAAKLIECNIEELNLALSTRNMRVGNDNIIQKLTLSQSSKIFTPLRFLYVIHLQAIDARDALAKSIYACLFEWLVEQINKSLVVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTKVDFDDNQDCLSLFEKKPLGLLSLLDEESTFPNGSDLTFANKLKQHLNSNSCFRGERGKAFTVCHYAGEVMYDTTGFLEKNRDLLHLNSIKLLSSCSLELPQIFASSLLNQSEKPVVGPLHKSGGADSQKLSVATKFKAQLFQLMQRLENTTPHFIRCIKPNNLQCPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHEKFARRRLCDVLGLLSSAQPGCPQLYMYSSADRVIPAASVEIFMEQQRRAGREVRACNFVSTPHVDHFRNDPILYSSQLTLFLEDCVLTCCKQSH 889
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22894 47875 - Bda026727.2 Bda14g00003 20054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00003 889 Gene3D Kinesin motor domain 171 787 IPR036961 -
Bda14g00003 889 Gene3D Myosin VI head, motor domain, U50 subdomain 404 529 - -
Bda14g00003 889 Gene3D - 552 744 - -
Bda14g00003 889 ProSiteProfiles Myosin motor domain profile. 172 800 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda14g00003 889 Gene3D - 347 403 - -
Bda14g00003 889 PANTHER MYOSIN 9 801 - -
Bda14g00003 889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 805 IPR027417 -
Bda14g00003 889 Pfam Eukaryotic protein of unknown function (DUF829) 793 876 IPR008547 -
Bda14g00003 889 PRINTS Myosin heavy chain signature 256 281 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda14g00003 889 PRINTS Myosin heavy chain signature 593 621 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda14g00003 889 PRINTS Myosin heavy chain signature 540 568 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda14g00003 889 PRINTS Myosin heavy chain signature 298 325 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda14g00003 889 PRINTS Myosin heavy chain signature 202 221 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda14g00003 889 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 119 168 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bda14g00003 889 SMART MYSc_2a 166 844 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda14g00003 889 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 801 - -
Bda14g00003 889 Pfam Myosin head (motor domain) 175 800 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda14g00003 889 CDD MYSc_Myo8 186 800 IPR036022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00274 Bda-Chr7:3897299 Bda14g00003 Bda-Chr14:22894 0 dispersed
Bda10g00134 Bda-Chr10:3785568 Bda14g00003 Bda-Chr14:22894 5.24E-23 dispersed
Bda10g00138 Bda-Chr10:3974309 Bda14g00003 Bda-Chr14:22894 1.13E-20 dispersed
Bda14g00003 Bda-Chr14:22894 Bda14g00464 Bda-Chr14:3335313 0 dispersed
Bda14g00003 Bda-Chr14:22894 Bda13g01585 Bda-Chr13:39355497 2.28E-173 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00003 - K10357 cit:102621697 1211.82