Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g00053 | ATGATTCCTGCTGACTGGATTTTCTTACTATTTCTCTCGAACTGTCTTTGTTCTTCAGCCATGGCTGCCCTCAATCTCACCATTCCTCATCAGCACCCTCACCCAGATTTGGTTGCTATGCAAGTTCAAAGAACAATCAATGAATCTGTATGGCGAAGACAAATACTTTCACTTCAAGAAAAAGATCAAACTTACCAGTGTCTCACCGGAAACCCAATCGACGATTGCTGGCGATGCGACTCCAACTGGGAGACGAATCGGCAAAGGCTCGCCGACTGCGGAATCGGATTCGGAAGAGACGCCATGGGGGGCAAGGGCGGCCAATTCTACATTGTCACGGACTCCTCCGATAAGGACCCGGCCAACCCCACCCCCGGCACCCTCCGGCACGCCGTGATCCAAGTGGAACCCCTCTGGATTATCTTCTCCAGAGACATGACTATAAAACTCAAACACGAACTCATCGTAAGCAGTTTCAAAACCATCGATGGCCGGGGAGCGAAAGTCCAGATAACCGGCGGCGGCTGCATTACTCTTCAGTTCATCTCGAACGTAATAATCCACAGCGTCTTCATCCACCATTGCGTACCCACCGGGAATTCAAACATTCGATCGAGTCCAACACACGTCGGGCACCGTGGCAGATCGGACGGCGACGGAATCTCAATCTACAGCTCGAGAAATATCTGGATCGATCATTGCTCCCTCTCGTACTGTACGGACGGACTTATAGACGCTATAATGGGGTCGACCGGAATCACCATCTCGAACAGCTATTTCTCACACCATAACGAGGTGATGCTTCTGGGGCACAACGATGGGCATGTACCAGACTCCGGTATGCAGGTGACCATCGCCTTCAACCACTTCGGCGAGGCGCTGGTGCAGCGTATGCCCAGGTGTAGACGCGGGTACATACACGTGGTCAACAATGATTTCACGGCGTGGGAGATGTACGCCATAGGAGGTAGTGCCAGTCCCACCATTAACAGCCAAGGGAATCGATACACCGCTCCGCTCGACCCTTACGCCAAGGAGGTGACTAAGCGGGTGGATACAGACGAGAGAGAGTGGAGCGATTGGAACTGGAGGACGGAGGGGGACATAATGGTGAACGGAGCGTTCTTCGTGCCATCAGGACAAGGCCTGAGCCCTCAGTTCACCAAAGCCTCCAGCGTGGAGCCCAAGTCCGTCGCTCTCATCGACCAACTCACCCTCTACTCCGGCGTGCTTGAAAACCCAGGGGACGGTGGTCAAAGCATAATATATCCAGGGTTCGACAGCACCACCAGTAGTAGCGGCTCAACCACTCCAAAACCGGGATCAAACGGCGGAGAAGACGACTATTTTGGAATGATATTCGGAGATCATTTTTCAAGCAGCTCCTCACCTCTCCGACCATTTCTTAGCTTATTAGTTCTTCCAAGTATATGGGTTATTATTTATTTGGGTTTTTACACAAGTGGATGTGTAATTAATTCATTGAGTATTTAA | 1494 | 51.27 | MIPADWIFLLFLSNCLCSSAMAALNLTIPHQHPHPDLVAMQVQRTINESVWRRQILSLQEKDQTYQCLTGNPIDDCWRCDSNWETNRQRLADCGIGFGRDAMGGKGGQFYIVTDSSDKDPANPTPGTLRHAVIQVEPLWIIFSRDMTIKLKHELIVSSFKTIDGRGAKVQITGGGCITLQFISNVIIHSVFIHHCVPTGNSNIRSSPTHVGHRGRSDGDGISIYSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNSYFSHHNEVMLLGHNDGHVPDSGMQVTIAFNHFGEALVQRMPRCRRGYIHVVNNDFTAWEMYAIGGSASPTINSQGNRYTAPLDPYAKEVTKRVDTDEREWSDWNWRTEGDIMVNGAFFVPSGQGLSPQFTKASSVEPKSVALIDQLTLYSGVLENPGDGGQSIIYPGFDSTTSSSGSTTPKPGSNGGEDDYFGMIFGDHFSSSSSPLRPFLSLLVLPSIWVIIYLGFYTSGCVINSLSI | 497 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 450586 | 452422 | + | Bda026785.1 | Bda14g00053 | 20104 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g00053 | 497 | Pfam | Pectate lyase | 151 | 334 | IPR002022 | - | |
Bda14g00053 | 497 | SUPERFAMILY | Pectin lyase-like | 61 | 389 | IPR011050 | - | |
Bda14g00053 | 497 | PRINTS | Pollen allergen Amb family signature | 390 | 413 | IPR018082 | - | |
Bda14g00053 | 497 | PRINTS | Pollen allergen Amb family signature | 93 | 110 | IPR018082 | - | |
Bda14g00053 | 497 | PRINTS | Pollen allergen Amb family signature | 217 | 238 | IPR018082 | - | |
Bda14g00053 | 497 | PRINTS | Pollen allergen Amb family signature | 117 | 142 | IPR018082 | - | |
Bda14g00053 | 497 | PRINTS | Pollen allergen Amb family signature | 153 | 169 | IPR018082 | - | |
Bda14g00053 | 497 | PRINTS | Pollen allergen Amb family signature | 361 | 385 | IPR018082 | - | |
Bda14g00053 | 497 | PRINTS | Pollen allergen Amb family signature | 297 | 316 | IPR018082 | - | |
Bda14g00053 | 497 | PRINTS | Pollen allergen Amb family signature | 319 | 338 | IPR018082 | - | |
Bda14g00053 | 497 | PANTHER | PECTATE LYASE | 10 | 417 | - | - | |
Bda14g00053 | 497 | MobiDBLite | consensus disorder prediction | 423 | 442 | - | - | |
Bda14g00053 | 497 | Gene3D | - | 70 | 412 | IPR012334 | - | |
Bda14g00053 | 497 | SMART | amb_all | 145 | 342 | IPR002022 | - | |
Bda14g00053 | 497 | PANTHER | PECTATE LYASE 18-RELATED | 10 | 417 | IPR045032 | GO:0030570 | |
Bda14g00053 | 497 | MobiDBLite | consensus disorder prediction | 422 | 442 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00767 | Bda-Chr3:6430415 | Bda14g00053 | Bda-Chr14:450586 | 9.54E-43 | dispersed | |
Bda14g00053 | Bda-Chr14:450586 | Bda14g00785 | Bda-Chr14:6062290 | 1.34E-172 | dispersed | |
Bda14g00053 | Bda-Chr14:450586 | Bda14g00368 | Bda-Chr14:2672466 | 0 | wgd | |
Bda14g00053 | Bda-Chr14:450586 | Bda15g00151 | Bda-Chr15:4087033 | 0 | wgd | |
Bda14g00053 | Bda-Chr14:450586 | Bda03g00722 | Bda-Chr3:6094621 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g00053 | K01728 | - | csv:101205739 | 713.375 |