Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g00072 | ACAATGGATTCCATGGAAGAAGAAAAAAGGAATTTAGATTCTCAACTATGGCATGCTTGTGCTGGTGGAATGGTTGAAATTCCATCCATTGATTCTAAAGTCTTTTATTTTCCTCAAGGCCACGCAGAACAGGCTCGTGGGGACGTGGACTTTGGAAGTCCTAGAATTTCCCCTCTCATTCTCTGCAGAGTTTCTGCAGTTCGATTCATGGCGGATTCAGAAACGGACGAGGTGTTTGCTGAGATGACTTTGATTCCTTTGAGAAGCAGTGATTTTGATCGTGTAGAAGATGACTGGACTGGGGGAAGTAATCAGAGTGAGAGCGAAGAAAAGCATACTTCTTTTGCTAAAACTTTGACTCAATCCGACGCCAACAATGGCGGTGGATTCTCCGTTCCTCGCTATTGCGCAGAAACGATTTTTCCTCCTTTGGACTACTCAGCGAATCCACCCGTTCAGACAATTCACGCGAAGGATGTTCACGGCCAGATTTGGAAGTTTAGGCATATTTATCGGGGAACTCCTCGCCGCCACCTTTTGACGACTGGATGGAGTAATTTAGTAAATTGCAAGAAGCTTGTGGCCGGAGATTCAATTGTGTTCTTGAAATCGGAGAATGGAGAGCTTCAGATCGGAATAAAGAGGGGAAAGAGGGGAATAGGAGGGCGATTTGATTTCTCAATTCCACCATTGGCGAGAAATTCAAATGGCGATCCGAGAGGAAAAGTGACTGCTGAATCCATAATCAAAGCGGTAAATCTTGCTTCGAGTGGGCAGGCTTTTGCAGTGAAGTATTTTCCGCGCTCAAACACACCAGAATTTTTCGTCAAGGCCTCCGCCGTGAGAGCTGCGGTGCGAGTTCGATGGTCGACCGGAATGAGATTCAAGATGGCTTTCGAAACAGAGGATTCCTCTAGAATTAGTTGGTTTATGGGAACTATATCTTCCATCCAACCGGCCGATCCCATCCGGTGGCCTAATTCTCCCTGGAGACTTCTGCAGGTAACTTGGGACGAGCCGGATTTGTTACAGAACGTGAAGTTTGTGAACCCATGGTCAGTAGAGGTGGTGACAAACATTATACCTTATCATGTCTCACCCTTTGCTCCACAAAGAAAGAAACCAAGGCTTCAGTGGAACTCCGATTTTTCGAGAATGCTAGACGATAATCGTGCAGGCATACAGGGAGCCAGGCATGTTAAATCACAGAATCCTCCATTAAAGGAGCCGAATGTTGAAAATCCAGCAAATATTTTGAAAGAAAACGAGACGAAAAAACCACACATCTTATTGTTTGGTCAAGTGATTCTTCCTGGCCAGAGAGTTTCCAAGGGTAACTCTAAAGCCACTACCGGAAATAGTTCATCGGAGAAGACAGATGCTTCCTACGGTGCTGCTACGTCACCTCATTGGAATAGTTCGCCGGAAAACTTATCTGATGCAGGGTCTGTATGGTGCAAAGATCACCAGAAAACTGTCCTCGATGGTGGCCGTCGTGAGGAATTAGTGGATCAATTGTTCTTCATGCGACGTTATTTCCGAATCCCGTAA | 1551 | 45.65 | TMDSMEEEKRNLDSQLWHACAGGMVEIPSIDSKVFYFPQGHAEQARGDVDFGSPRISPLILCRVSAVRFMADSETDEVFAEMTLIPLRSSDFDRVEDDWTGGSNQSESEEKHTSFAKTLTQSDANNGGGFSVPRYCAETIFPPLDYSANPPVQTIHAKDVHGQIWKFRHIYRGTPRRHLLTTGWSNLVNCKKLVAGDSIVFLKSENGELQIGIKRGKRGIGGRFDFSIPPLARNSNGDPRGKVTAESIIKAVNLASSGQAFAVKYFPRSNTPEFFVKASAVRAAVRVRWSTGMRFKMAFETEDSSRISWFMGTISSIQPADPIRWPNSPWRLLQVTWDEPDLLQNVKFVNPWSVEVVTNIIPYHVSPFAPQRKKPRLQWNSDFSRMLDDNRAGIQGARHVKSQNPPLKEPNVENPANILKENETKKPHILLFGQVILPGQRVSKGNSKATTGNSSSEKTDASYGAATSPHWNSSPENLSDAGSVWCKDHQKTVLDGGRREELVDQLFFMRRYFRIP | 516 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 567865 | 569515 | + | Bda026804.1 | Bda14g00072 | 20123 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g00072 | 516 | MobiDBLite | consensus disorder prediction | 96 | 115 | - | - | |
Bda14g00072 | 516 | MobiDBLite | consensus disorder prediction | 442 | 478 | - | - | |
Bda14g00072 | 516 | PANTHER | AUXIN RESPONSE FACTOR 16 | 420 | 461 | - | - | |
Bda14g00072 | 516 | Gene3D | - | 113 | 216 | IPR015300 | - | |
Bda14g00072 | 516 | Pfam | Auxin response factor | 251 | 334 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Bda14g00072 | 516 | SUPERFAMILY | DNA-binding pseudobarrel domain | 109 | 214 | IPR015300 | - | |
Bda14g00072 | 516 | Gene3D | - | 288 | 361 | - | - | |
Bda14g00072 | 516 | Pfam | B3 DNA binding domain | 115 | 215 | IPR003340 | GO:0003677 | |
Bda14g00072 | 516 | SMART | B3_2 | 115 | 217 | IPR003340 | GO:0003677 | |
Bda14g00072 | 516 | CDD | B3_DNA | 114 | 215 | IPR003340 | GO:0003677 | |
Bda14g00072 | 516 | ProSiteProfiles | B3 DNA-binding domain profile. | 115 | 217 | IPR003340 | GO:0003677 | |
Bda14g00072 | 516 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 6 | 415 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bda14g00072 | 516 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 420 | 461 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bda14g00072 | 516 | PANTHER | AUXIN RESPONSE FACTOR 16 | 6 | 415 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00294 | Bda-Chr1:27818086 | Bda14g00072 | Bda-Chr14:567865 | 1.26E-66 | dispersed | |
Bda14g00072 | Bda-Chr14:567865 | Bda09g00878 | Bda-Chr9:22884781 | 1.39E-89 | dispersed | |
Bda14g00072 | Bda-Chr14:567865 | Bda02g00757 | Bda-Chr2:48348964 | 3.42E-174 | wgd | |
Bda14g00072 | Bda-Chr14:567865 | Bda03g00741 | Bda-Chr3:6302195 | 1.16E-179 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16985 | PF02362 | B3 | 1.50E-18 | CL0405 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g00072 | - | - | pvy:116109828 | 570.466 |