Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00072 ACAATGGATTCCATGGAAGAAGAAAAAAGGAATTTAGATTCTCAACTATGGCATGCTTGTGCTGGTGGAATGGTTGAAATTCCATCCATTGATTCTAAAGTCTTTTATTTTCCTCAAGGCCACGCAGAACAGGCTCGTGGGGACGTGGACTTTGGAAGTCCTAGAATTTCCCCTCTCATTCTCTGCAGAGTTTCTGCAGTTCGATTCATGGCGGATTCAGAAACGGACGAGGTGTTTGCTGAGATGACTTTGATTCCTTTGAGAAGCAGTGATTTTGATCGTGTAGAAGATGACTGGACTGGGGGAAGTAATCAGAGTGAGAGCGAAGAAAAGCATACTTCTTTTGCTAAAACTTTGACTCAATCCGACGCCAACAATGGCGGTGGATTCTCCGTTCCTCGCTATTGCGCAGAAACGATTTTTCCTCCTTTGGACTACTCAGCGAATCCACCCGTTCAGACAATTCACGCGAAGGATGTTCACGGCCAGATTTGGAAGTTTAGGCATATTTATCGGGGAACTCCTCGCCGCCACCTTTTGACGACTGGATGGAGTAATTTAGTAAATTGCAAGAAGCTTGTGGCCGGAGATTCAATTGTGTTCTTGAAATCGGAGAATGGAGAGCTTCAGATCGGAATAAAGAGGGGAAAGAGGGGAATAGGAGGGCGATTTGATTTCTCAATTCCACCATTGGCGAGAAATTCAAATGGCGATCCGAGAGGAAAAGTGACTGCTGAATCCATAATCAAAGCGGTAAATCTTGCTTCGAGTGGGCAGGCTTTTGCAGTGAAGTATTTTCCGCGCTCAAACACACCAGAATTTTTCGTCAAGGCCTCCGCCGTGAGAGCTGCGGTGCGAGTTCGATGGTCGACCGGAATGAGATTCAAGATGGCTTTCGAAACAGAGGATTCCTCTAGAATTAGTTGGTTTATGGGAACTATATCTTCCATCCAACCGGCCGATCCCATCCGGTGGCCTAATTCTCCCTGGAGACTTCTGCAGGTAACTTGGGACGAGCCGGATTTGTTACAGAACGTGAAGTTTGTGAACCCATGGTCAGTAGAGGTGGTGACAAACATTATACCTTATCATGTCTCACCCTTTGCTCCACAAAGAAAGAAACCAAGGCTTCAGTGGAACTCCGATTTTTCGAGAATGCTAGACGATAATCGTGCAGGCATACAGGGAGCCAGGCATGTTAAATCACAGAATCCTCCATTAAAGGAGCCGAATGTTGAAAATCCAGCAAATATTTTGAAAGAAAACGAGACGAAAAAACCACACATCTTATTGTTTGGTCAAGTGATTCTTCCTGGCCAGAGAGTTTCCAAGGGTAACTCTAAAGCCACTACCGGAAATAGTTCATCGGAGAAGACAGATGCTTCCTACGGTGCTGCTACGTCACCTCATTGGAATAGTTCGCCGGAAAACTTATCTGATGCAGGGTCTGTATGGTGCAAAGATCACCAGAAAACTGTCCTCGATGGTGGCCGTCGTGAGGAATTAGTGGATCAATTGTTCTTCATGCGACGTTATTTCCGAATCCCGTAA 1551 45.65 TMDSMEEEKRNLDSQLWHACAGGMVEIPSIDSKVFYFPQGHAEQARGDVDFGSPRISPLILCRVSAVRFMADSETDEVFAEMTLIPLRSSDFDRVEDDWTGGSNQSESEEKHTSFAKTLTQSDANNGGGFSVPRYCAETIFPPLDYSANPPVQTIHAKDVHGQIWKFRHIYRGTPRRHLLTTGWSNLVNCKKLVAGDSIVFLKSENGELQIGIKRGKRGIGGRFDFSIPPLARNSNGDPRGKVTAESIIKAVNLASSGQAFAVKYFPRSNTPEFFVKASAVRAAVRVRWSTGMRFKMAFETEDSSRISWFMGTISSIQPADPIRWPNSPWRLLQVTWDEPDLLQNVKFVNPWSVEVVTNIIPYHVSPFAPQRKKPRLQWNSDFSRMLDDNRAGIQGARHVKSQNPPLKEPNVENPANILKENETKKPHILLFGQVILPGQRVSKGNSKATTGNSSSEKTDASYGAATSPHWNSSPENLSDAGSVWCKDHQKTVLDGGRREELVDQLFFMRRYFRIP 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 567865 569515 + Bda026804.1 Bda14g00072 20123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00072 516 MobiDBLite consensus disorder prediction 96 115 - -
Bda14g00072 516 MobiDBLite consensus disorder prediction 442 478 - -
Bda14g00072 516 PANTHER AUXIN RESPONSE FACTOR 16 420 461 - -
Bda14g00072 516 Gene3D - 113 216 IPR015300 -
Bda14g00072 516 Pfam Auxin response factor 251 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bda14g00072 516 SUPERFAMILY DNA-binding pseudobarrel domain 109 214 IPR015300 -
Bda14g00072 516 Gene3D - 288 361 - -
Bda14g00072 516 Pfam B3 DNA binding domain 115 215 IPR003340 GO:0003677
Bda14g00072 516 SMART B3_2 115 217 IPR003340 GO:0003677
Bda14g00072 516 CDD B3_DNA 114 215 IPR003340 GO:0003677
Bda14g00072 516 ProSiteProfiles B3 DNA-binding domain profile. 115 217 IPR003340 GO:0003677
Bda14g00072 516 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 415 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bda14g00072 516 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 420 461 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bda14g00072 516 PANTHER AUXIN RESPONSE FACTOR 16 6 415 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00294 Bda-Chr1:27818086 Bda14g00072 Bda-Chr14:567865 1.26E-66 dispersed
Bda14g00072 Bda-Chr14:567865 Bda09g00878 Bda-Chr9:22884781 1.39E-89 dispersed
Bda14g00072 Bda-Chr14:567865 Bda02g00757 Bda-Chr2:48348964 3.42E-174 wgd
Bda14g00072 Bda-Chr14:567865 Bda03g00741 Bda-Chr3:6302195 1.16E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16985 PF02362 B3 1.50E-18 CL0405 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00072 - - pvy:116109828 570.466